Serialized Form

Package com.jgoodies.forms.debug
- Class com.jgoodies.forms.debug.FormDebugPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - paintInBackground
```
boolean paintInBackground
```
      Specifies whether the grid shall be painted in the background. Is off by default and so the grid is painted in the foreground.
    - paintDiagonals
```
boolean paintDiagonals
```
      Specifies whether the container's diagonals should be painted.
    - gridColor
```
java.awt.Color gridColor
```
      Holds the color used to paint the debug grid.
Package com.jgoodies.forms.layout
- Class com.jgoodies.forms.layout.CellConstraints extends java.lang.Object implements Serializable
  - Serialized Fields
    - gridX
```
int gridX
```
      Describes the component's horizontal grid origin (starts at 1).
    - gridY
```
int gridY
```
      Describes the component's vertical grid origin (starts at 1).
    - gridWidth
```
int gridWidth
```
      Describes the component's horizontal grid extend (number of cells).
    - gridHeight
```
int gridHeight
```
      Describes the component's vertical grid extent (number of cells).
    - hAlign
```
CellConstraints.Alignment hAlign
```
      Describes the component's horizontal alignment.
    - vAlign
```
CellConstraints.Alignment vAlign
```
      Describes the component's vertical alignment.
    - insets
```
java.awt.Insets insets
```
      Describes the component's Insets in it's display area.
- Class com.jgoodies.forms.layout.CellConstraints.Alignment extends java.lang.Object implements Serializable
  - Serialization Methods
    - readResolve
```
private java.lang.Object readResolve()
```
  - Serialized Fields
    - ordinal
```
int ordinal
```
- Class com.jgoodies.forms.layout.ColumnSpec extends FormSpec implements Serializable
- Class com.jgoodies.forms.layout.ConstantSize extends java.lang.Object implements Serializable
  - Serialized Fields
    - value
```
double value
```
    - unit
```
ConstantSize.Unit unit
```
- Class com.jgoodies.forms.layout.ConstantSize.Unit extends java.lang.Object implements Serializable
  - Serialization Methods
    - readResolve
```
private java.lang.Object readResolve()
```
  - Serialized Fields
    - ordinal
```
int ordinal
```
- Class com.jgoodies.forms.layout.FormLayout extends java.lang.Object implements Serializable
  - Serialization Methods
    - writeObject
```
private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
```
      In addition to the default serialization mechanism this class invalidates the component size cache. The cache will be populated again after the deserialization. Also, the fields colComponents and rowComponents have been marked as transient to exclude them from the serialization.
      
      Throws:
      
      java.io.IOException
  - Serialized Fields
    - colSpecs
```
java.util.List<E> colSpecs
```
      Holds the column specifications.
      
      See Also:
      
      ColumnSpec, FormLayout.getColumnCount(), FormLayout.getColumnSpec(int), FormLayout.appendColumn(ColumnSpec), FormLayout.insertColumn(int, ColumnSpec), FormLayout.removeColumn(int)
    - rowSpecs
```
java.util.List<E> rowSpecs
```
      Holds the row specifications.
      
      See Also:
      
      RowSpec, FormLayout.getRowCount(), FormLayout.getRowSpec(int), FormLayout.appendRow(RowSpec), FormLayout.insertRow(int, RowSpec), FormLayout.removeRow(int)
    - colGroupIndices
```
int[][] colGroupIndices
```
      Holds the column groups as an array of arrays of column indices.
      
      See Also:
      
      FormLayout.getColumnGroups(), FormLayout.setColumnGroups(int[][]), FormLayout.addGroupedColumn(int)
    - rowGroupIndices
```
int[][] rowGroupIndices
```
      Holds the row groups as an array of arrays of row indices.
      
      See Also:
      
      FormLayout.getRowGroups(), FormLayout.setRowGroups(int[][]), FormLayout.addGroupedRow(int)
    - constraintMap
```
java.util.Map<K,V> constraintMap
```
      Maps components to their associated CellConstraints.
      
      See Also:
      
      CellConstraints, FormLayout.getConstraints(Component), FormLayout.setConstraints(Component, CellConstraints)
    - componentSizeCache
```
com.jgoodies.forms.layout.FormLayout.ComponentSizeCache componentSizeCache
```
      Caches component minimum and preferred sizes. All requests for component sizes shall be directed to the cache.
    - minimumWidthMeasure
```
com.jgoodies.forms.layout.FormLayout.Measure minimumWidthMeasure
```
      These functional objects are used to measure component sizes. They abstract from horizontal and vertical orientation and so, allow to implement the layout algorithm for both orientations with a single set of methods.
    - minimumHeightMeasure
```
com.jgoodies.forms.layout.FormLayout.Measure minimumHeightMeasure
```
    - preferredWidthMeasure
```
com.jgoodies.forms.layout.FormLayout.Measure preferredWidthMeasure
```
    - preferredHeightMeasure
```
com.jgoodies.forms.layout.FormLayout.Measure preferredHeightMeasure
```
- Class com.jgoodies.forms.layout.FormSpec extends java.lang.Object implements Serializable
  - Serialized Fields
    - defaultAlignment
```
FormSpec.DefaultAlignment defaultAlignment
```
      Holds the default alignment that will be used if a cell does not override this default.
    - size
```
Size size
```
      Holds the size that describes how to size this column or row.
    - resizeWeight
```
double resizeWeight
```
      Holds the resize weight; is 0 if not used.
- Class com.jgoodies.forms.layout.FormSpec.DefaultAlignment extends java.lang.Object implements Serializable
  - Serialization Methods
    - readResolve
```
private java.lang.Object readResolve()
```
  - Serialized Fields
    - ordinal
```
int ordinal
```
- Class com.jgoodies.forms.layout.RowSpec extends FormSpec implements Serializable
Package com.microstar.xml
- Class com.microstar.xml.XmlException extends java.lang.Exception implements Serializable
  - Serialized Fields
    - _message
```
java.lang.String _message
```
    - _cause
```
java.lang.Throwable _cause
```
    - _systemId
```
java.lang.String _systemId
```
    - _line
```
int _line
```
    - _column
```
int _column
```
Package com.microstar.xml.demo
- Class com.microstar.xml.demo.XmlApplet extends java.applet.Applet implements Serializable
  - Serialized Fields
    - isApplet
```
boolean isApplet
```
      Flag to show whether we're running as an applet or application.
    - parser
```
XmlParser parser
```
    - textArea
```
java.awt.TextArea textArea
```
    - buttonPanel
```
java.awt.Panel buttonPanel
```
    - startButton
```
java.awt.Button startButton
```
Package org.cipres.kepler
- Class org.cipres.kepler.SubsetChooser extends javax.swing.JFrame implements Serializable
  
  serialVersionUID:
  
  -4694408842783273897L
  - Serialized Fields
    - pnlSubsetChooser
```
javax.swing.JPanel pnlSubsetChooser
```
    - pnlMain
```
javax.swing.JPanel pnlMain
```
    - displayObjects
```
DisplayObject[] displayObjects
```
    - checkboxes
```
javax.swing.JCheckBox[] checkboxes
```
    - dialog
```
javax.swing.JDialog dialog
```
    - headerText
```
java.lang.String headerText
```
Package org.ecoinformatics.seek.dataquery
- Class org.ecoinformatics.seek.dataquery.DataQueryAction extends javax.swing.AbstractAction implements Serializable
- Class org.ecoinformatics.seek.dataquery.HsqlDataQueryAction extends DataQueryAction implements Serializable
  - Serialized Fields
    - conn
```
java.sql.Connection conn
```
    - stmt
```
java.sql.Statement stmt
```
    - sql
```
java.lang.String sql
```
    - rs
```
java.sql.ResultSet rs
```
    - printResultset
```
boolean printResultset
```
Package org.ecoinformatics.seek.datasource
- Class org.ecoinformatics.seek.datasource.EcogridCompressedDataCacheItem extends EcogridDataCacheItem implements Serializable
  - Serialized Fields
    - unCompressedFilePath
```
java.lang.String unCompressedFilePath
```
    - unCompressedCacheItemDir
```
java.io.File unCompressedCacheItemDir
```
    - unCompressedFileList
```
java.lang.String[] unCompressedFileList
```
    - refresh
```
boolean refresh
```
- Class org.ecoinformatics.seek.datasource.EcogridDataCacheItem extends BufferedDataCacheObject implements Serializable
  - Serialized Fields
    - mEndPoint
```
java.lang.String mEndPoint
```
    - mIsTarFile
```
boolean mIsTarFile
```
    - mEntityIdentifier
```
java.lang.String mEntityIdentifier
```
- Class org.ecoinformatics.seek.datasource.EcogridGZippedDataCacheItem extends EcogridCompressedDataCacheItem implements Serializable
- Class org.ecoinformatics.seek.datasource.EcogridMetaDataCacheItem extends EcogridDataCacheItem implements Serializable
  - Serialized Fields
    - mRecordId
```
java.lang.String mRecordId
```
- Class org.ecoinformatics.seek.datasource.EcogridQueryDataCacheItem extends DataCacheObject implements Serializable
  - Serialized Fields
    - _query
```
org.ecoinformatics.ecogrid.queryservice.query.QueryType _query
```
    - _resultset
```
org.ecoinformatics.ecogrid.queryservice.resultset.ResultsetType _resultset
```
- Class org.ecoinformatics.seek.datasource.EcogridTarArchivedDataCacheItem extends EcogridCompressedDataCacheItem implements Serializable
- Class org.ecoinformatics.seek.datasource.EcogridZippedDataCacheItem extends EcogridCompressedDataCacheItem implements Serializable
Package org.ecoinformatics.seek.ecogrid
- Class org.ecoinformatics.seek.ecogrid.AddServicesFromRegistrySearchAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - current
```
EcogridPreferencesTab current
```
    - parent
```
EcogridPreferencesTab parent
```
- Class org.ecoinformatics.seek.ecogrid.CancelSearchAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - current
```
java.awt.Window current
```
    - parent
```
EcogridPreferencesTab parent
```
- Class org.ecoinformatics.seek.ecogrid.CheckBoxTableCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - topTable
```
javax.swing.JTable topTable
```
    - selectedServiceList
```
java.util.Vector<E> selectedServiceList
```
    - topRowNum
```
int topRowNum
```
- Class org.ecoinformatics.seek.ecogrid.DocumentType extends java.lang.Object implements Serializable
  - Serialized Fields
    - label
```
java.lang.String label
```
    - namespace
```
java.lang.String namespace
```
    - metadataSpecificationClassName
```
java.lang.String metadataSpecificationClassName
```
- Class org.ecoinformatics.seek.ecogrid.EcogridPreferencesTab extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _tabName
```
java.lang.String _tabName
```
    - mainPanel
```
javax.swing.JPanel mainPanel
```
    - textPanel
```
javax.swing.JPanel textPanel
```
    - textLabel
```
javax.swing.JLabel textLabel
```
    - buttonPanel
```
javax.swing.JPanel buttonPanel
```
    - servicesDisplayPanel
```
ServicesDisplayPanel servicesDisplayPanel
```
    - displayText
```
java.lang.String displayText
```
    - selectedServiceList
```
java.util.Vector<E> selectedServiceList
```
    - refreshButton
```
javax.swing.JButton refreshButton
```
    - keepExistingCheckbox
```
javax.swing.JCheckBox keepExistingCheckbox
```
    - newButtonPanel
```
javax.swing.JPanel newButtonPanel
```
    - controller
```
EcoGridServicesController controller
```
      Description of the Field
    - originalServiceList
```
java.util.Vector<E> originalServiceList
```
    - parentFrame
```
TableauFrame parentFrame
```
- Class org.ecoinformatics.seek.ecogrid.EcoGridService extends java.lang.Object implements Serializable
  - Serialized Fields
    - serviceGroup
```
java.lang.String serviceGroup
```
    - description
```
java.lang.String description
```
    - serviceName
```
java.lang.String serviceName
```
    - wsdlURL
```
java.lang.String wsdlURL
```
    - serviceType
```
java.lang.String serviceType
```
    - endPoint
```
java.lang.String endPoint
```
    - serviceClassification
```
java.lang.String serviceClassification
```
    - documentTypeList
```
DocumentType[] documentTypeList
```
- Class org.ecoinformatics.seek.ecogrid.InitialRegistrySearchDialogAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - frame
```
EcogridPreferencesTab frame
```
    - originalServiceVector
```
java.util.Vector<E> originalServiceVector
```
- Class org.ecoinformatics.seek.ecogrid.RegistrySearchDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - mainPanel
```
javax.swing.JPanel mainPanel
```
    - searchButton
```
javax.swing.JButton searchButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - optionList
```
javax.swing.JComboBox<E> optionList
```
    - inputField
```
javax.swing.JTextField inputField
```
    - options
```
java.util.Vector<E> options
```
    - parent
```
EcogridPreferencesTab parent
```
    - xpathMap
```
java.util.Hashtable<K,V> xpathMap
```
    - originalServiceList
```
java.util.Vector<E> originalServiceList
```
- Class org.ecoinformatics.seek.ecogrid.SearchRegistryAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - searchDialog
```
RegistrySearchDialog searchDialog
```
    - parent
```
EcogridPreferencesTab parent
```
    - registryEndPoint
```
java.lang.String registryEndPoint
```
    - client
```
org.ecoinformatics.ecogrid.client.RegistryServiceClient client
```
    - sessionId
```
java.lang.String sessionId
```
- Class org.ecoinformatics.seek.ecogrid.SearchRegistryResultFrame extends EcogridPreferencesTab implements Serializable
  - Serialized Fields
    - okButton
```
javax.swing.JButton okButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - parent
```
EcogridPreferencesTab parent
```
- Class org.ecoinformatics.seek.ecogrid.SelectableDocumentType extends DocumentType implements Serializable
  - Serialized Fields
    - isSelected
```
boolean isSelected
```
    - isEnable
```
boolean isEnable
```
- Class org.ecoinformatics.seek.ecogrid.SelectableEcoGridService extends EcoGridService implements Serializable
  - Serialized Fields
    - selectableServiceName
```
SelectableServiceName selectableServiceName
```
    - selectableDcoumentTypeList
```
SelectableDocumentType[] selectableDcoumentTypeList
```
    - selectedDocumentTypeList
```
SelectableDocumentType[] selectedDocumentTypeList
```
- Class org.ecoinformatics.seek.ecogrid.SelectableServiceName extends java.lang.Object implements Serializable
  - Serialized Fields
    - serviceName
```
java.lang.String serviceName
```
    - isSelected
```
boolean isSelected
```
    - isEnable
```
boolean isEnable
```
- Class org.ecoinformatics.seek.ecogrid.ServicesDisplayPanel extends javax.swing.JScrollPane implements Serializable
  - Serialized Fields
    - selectedServiceList
```
java.util.Vector<E> selectedServiceList
```
    - tableModel
```
ServicesDisplayTableModel tableModel
```
    - table
```
javax.swing.JTable table
```
    - checkBoxRenderer
```
CheckBoxTableCellRenderer checkBoxRenderer
```
    - tableRenderer
```
TableTableCellRenderer tableRenderer
```
- Class org.ecoinformatics.seek.ecogrid.ServicesDisplayTableModel extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - selectedServicesList
```
java.util.Vector<E> selectedServicesList
```
    - headerLabel
```
java.lang.String[] headerLabel
```
    - rowHeightFactor
```
java.util.Vector<E> rowHeightFactor
```
- Class org.ecoinformatics.seek.ecogrid.ServicesListModificationPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
- Class org.ecoinformatics.seek.ecogrid.ServicesRefreshAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - prefTab
```
EcogridPreferencesTab prefTab
```
- Class org.ecoinformatics.seek.ecogrid.TableTableCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - selectedServiceList
```
java.util.Vector<E> selectedServiceList
```
    - topTable
```
javax.swing.JTable topTable
```
Package org.ecoinformatics.seek.ecogrid.exception
- Class org.ecoinformatics.seek.ecogrid.exception.EcoGridException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.InvalidEcogridQueryException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.InvalidEcoGridServiceException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.NoMetadataSpecificationClassException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.NoSearchEndPointException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.NULLEcogridConfigurationException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.NULLSearchNamespaceException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.ecogrid.exception.UnrecognizedDocumentTypeException extends java.lang.Exception implements Serializable

Package org.ecoinformatics.seek.ecogrid.quicksearch

Class org.ecoinformatics.seek.ecogrid.quicksearch.DataSearchResultTree extends PTree implements Serializable
- Serialized Fields
  - popup
```
javax.swing.JPopupMenu popup
```
  - getMetadataMenuItem
```
javax.swing.JMenuItem getMetadataMenuItem
```
  - panel
```
org.ecoinformatics.seek.ecogrid.quicksearch.ResultPanel panel
```

Class org.ecoinformatics.seek.ecogrid.quicksearch.DatasetPanel extends javax.swing.JPanel implements Serializable

Serialized Fields

_searchUIJPanel
```
SearchUIJPanel _searchUIJPanel
```

quickSearchAction

org.ecoinformatics.seek.ecogrid.quicksearch.QuickSearchAction quickSearchAction

cancelQuickSearchAction

org.ecoinformatics.seek.ecogrid.quicksearch.QuickSearchCancelAction cancelQuickSearchAction

_progressBar
```
javax.swing.JProgressBar _progressBar
```
_progressLabel
```
javax.swing.JLabel _progressLabel
```
resultsRoot
```
CompositeEntity resultsRoot
```

resultPanel

org.ecoinformatics.seek.ecogrid.quicksearch.ResultPanel resultPanel

searchController

EcoGridServicesController searchController

_frame
```
TableauFrame _frame
```
name
```
java.lang.String name
```

Class org.ecoinformatics.seek.ecogrid.quicksearch.GetMetadataAction extends FigureAction implements Serializable
- Serialized Fields
  - metadataSource
```
java.io.Reader metadataSource
```
  - nameSpace
```
java.lang.String nameSpace
```
  - htmlFileName
```
java.lang.String htmlFileName
```
  - metadata
```
java.net.URL metadata
```
  - item
```
ResultRecord item
```
  - configuration
```
Configuration configuration
```

Package org.ecoinformatics.seek.querybuilder

Class org.ecoinformatics.seek.querybuilder.DBSelectTableModelAdv extends DBSelectTableModelBase implements Serializable
- Serialized Fields
  - COLUMN_TITLES
```
java.lang.String[] COLUMN_TITLES
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableModelBase extends javax.swing.table.AbstractTableModel implements Serializable
- Serialized Fields
  - mItems
```
java.util.Vector<E> mItems
```
  - mSchema
```
DSSchemaIFace mSchema
```
  - mAvailTableNames
```
java.util.Vector<E> mAvailTableNames
```
  - mAvailFieldNames
```
java.util.Vector<E> mAvailFieldNames
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableModelDeleteAction extends javax.swing.AbstractAction implements Serializable
- Serialized Fields
  - model
```
DBSelectTableModelStd model
```
  - selectedRow
```
int selectedRow
```
  - table
```
DBSelectTableUIBase table
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableModelStd extends DBSelectTableModelBase implements Serializable
- Serialized Fields
  - mModelHash
```
java.util.Hashtable<K,V> mModelHash
```
  - COLUMN_TITLES
```
java.lang.String[] COLUMN_TITLES
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableOverviewModel extends javax.swing.table.AbstractTableModel implements Serializable
- Serialized Fields
  - mTable
```
DSTableIFace mTable
```
  - mItems
```
java.util.Vector<E> mItems
```
  - mTableView
```
javax.swing.JTable mTableView
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableOverviewTable extends javax.swing.JTable implements Serializable
- Serialized Fields
  - mAceptableActions
```
int mAceptableActions
```
  - mDragSource
```
java.awt.dnd.DragSource mDragSource
```
  - mDataFlavor
```
java.awt.datatransfer.DataFlavor mDataFlavor
```
Class org.ecoinformatics.seek.querybuilder.DBSelectTableUIAdv extends DBSelectTableUIBase implements Serializable

Class org.ecoinformatics.seek.querybuilder.DBSelectTableUIBase extends javax.swing.JTable implements Serializable

Serialized Fields

mModel
```
DBSelectTableModelBase mModel
```

mDataFlavor

java.awt.datatransfer.DataFlavor[] mDataFlavor

mAceptableActions
```
int mAceptableActions
```
mDropTarget
```
java.awt.dnd.DropTarget mDropTarget
```
mListeners
```
java.util.Vector<E> mListeners
```

mIsDisplayedCheckbox

javax.swing.JCheckBox mIsDisplayedCheckbox

mTablesComboBox

javax.swing.JComboBox<E> mTablesComboBox

mFieldsComboBox

javax.swing.JComboBox<E> mFieldsComboBox

mBoolOpers
```
javax.swing.JComboBox<E> mBoolOpers
```
mDragTableName
```
java.lang.String mDragTableName
```
mCheckOkToDrop
```
boolean mCheckOkToDrop
```
mOkToDrop
```
boolean mOkToDrop
```

Class org.ecoinformatics.seek.querybuilder.DBSelectTableUIStd extends DBSelectTableUIBase implements Serializable
Class org.ecoinformatics.seek.querybuilder.DBTableDesktopPane extends javax.swing.JDesktopPane implements Serializable
- Serialized Fields
  - mTableJoins
```
DBTableJoin mTableJoins
```
  - mSchema
```
DSSchemaIFace mSchema
```
  - mTables
```
java.util.Vector<E> mTables
```
  - mTableModelListener
```
javax.swing.event.TableModelListener mTableModelListener
```
  - mJifX
```
int mJifX
```

Class org.ecoinformatics.seek.querybuilder.DBTableFrame extends javax.swing.JInternalFrame implements Serializable

Serialized Fields

mId
```
int mId
```
mTableDef
```
DSTableIFace mTableDef
```
mList
```
DBTableList mList
```
mScrollPane
```
javax.swing.JScrollPane mScrollPane
```
mModel
```
DBTableListModel mModel
```
mListBnds
```
java.awt.Rectangle mListBnds
```
mValue
```
int mValue
```
mBoundsChanging
```
boolean mBoundsChanging
```

mTableModelListener

javax.swing.event.TableModelListener mTableModelListener

Class org.ecoinformatics.seek.querybuilder.DBTableList extends javax.swing.JList implements Serializable

Serialized Fields

mAceptableActions
```
int mAceptableActions
```
mDropTarget
```
java.awt.dnd.DropTarget mDropTarget
```
mDragSource
```
java.awt.dnd.DragSource mDragSource
```

mDataFlavor

java.awt.datatransfer.DataFlavor mDataFlavor

mDragOverItem
```
DBTableField mDragOverItem
```

mRenderer

org.ecoinformatics.seek.querybuilder.DBTableListCellRenderer mRenderer

mModel
```
DBTableListModel mModel
```
mTableJoins
```
DBTableJoin mTableJoins
```

Class org.ecoinformatics.seek.querybuilder.DBTableListModel extends javax.swing.AbstractListModel implements Serializable
- Serialized Fields
  - mTableFrame
```
DBTableFrame mTableFrame
```
  - mItems
```
java.util.Vector<E> mItems
```

Class org.ecoinformatics.seek.querybuilder.DBWhereList extends javax.swing.JList implements Serializable

Serialized Fields

mModel
```
DBWhereModel mModel
```
mSchema
```
DSSchemaIFace mSchema
```
mAceptableActions
```
int mAceptableActions
```

mRenderer

org.ecoinformatics.seek.querybuilder.DBWhereListCellRenderer mRenderer

mDropTarget
```
java.awt.dnd.DropTarget mDropTarget
```

mDataFlavor

java.awt.datatransfer.DataFlavor mDataFlavor

mDragOverItem
```
DBWhereIFace mDragOverItem
```

Class org.ecoinformatics.seek.querybuilder.DBWhereModel extends javax.swing.AbstractListModel implements Serializable
- Serialized Fields
  - mItems
```
java.util.Vector<E> mItems
```
  - mRootObj
```
DBWhereIFace mRootObj
```

Class org.ecoinformatics.seek.querybuilder.DBWherePanel extends javax.swing.JPanel implements Serializable

Serialized Fields

mList
```
DBWhereList mList
```
mModel
```
DBWhereModel mModel
```
mSchema
```
DSSchemaIFace mSchema
```
mAddCondBtn
```
javax.swing.JButton mAddCondBtn
```
mAddAndOperBtn
```
javax.swing.JButton mAddAndOperBtn
```
mAddOROperBtn
```
javax.swing.JButton mAddOROperBtn
```
mRemoveBtn
```
javax.swing.JButton mRemoveBtn
```
mNameField
```
javax.swing.JTextField mNameField
```
mCriteriaField
```
javax.swing.JTextField mCriteriaField
```
mEditorPane
```
javax.swing.JEditorPane mEditorPane
```
mTextScrollPane
```
javax.swing.JScrollPane mTextScrollPane
```

mTablesCombobox

javax.swing.JComboBox<E> mTablesCombobox

mFieldsCombobox

javax.swing.JComboBox<E> mFieldsCombobox

mCondCombobox
```
javax.swing.JComboBox<E> mCondCombobox
```
mOperCombobox
```
javax.swing.JComboBox<E> mOperCombobox
```
mCondInspPanel
```
javax.swing.JPanel mCondInspPanel
```
mOperInspPanel
```
javax.swing.JPanel mOperInspPanel
```
mCurrInspPanel
```
javax.swing.JPanel mCurrInspPanel
```
mInspContainer
```
javax.swing.JPanel mInspContainer
```
mRejectChanges
```
boolean mRejectChanges
```

mModelListener

javax.swing.event.TableModelListener mModelListener

Class org.ecoinformatics.seek.querybuilder.QBApp extends javax.swing.JPanel implements Serializable

Serialized Fields

mDoingDemo
```
boolean mDoingDemo
```
mDoingDemoTests
```
boolean mDoingDemoTests
```
mDemoPanel
```
javax.swing.JPanel mDemoPanel
```
mIsChanged
```
boolean mIsChanged
```
mNoOuterUI
```
boolean mNoOuterUI
```
mStatusField
```
javax.swing.JTextField mStatusField
```
mMenuBar
```
javax.swing.JMenuBar mMenuBar
```

mSaveQueryAction

org.ecoinformatics.seek.querybuilder.QBApp.GenericMenuAction mSaveQueryAction

mSaveSchemaAction

org.ecoinformatics.seek.querybuilder.QBApp.GenericMenuAction mSaveSchemaAction

mFrame
```
javax.swing.JFrame mFrame
```
mApplet
```
QBApplet mApplet
```
mTabbedPane
```
javax.swing.JTabbedPane mTabbedPane
```
mTabInx
```
int mTabInx
```
mLastTabInx
```
int mLastTabInx
```
mSchema
```
DSSchemaIFace mSchema
```
mQueryDef
```
DBQueryDef mQueryDef
```
mStdSP
```
QBSplitPaneStandard mStdSP
```
mSQLSP
```
QBSplitPaneSQL mSQLSP
```
mBuilderTab
```
QBBuilderInterface mBuilderTab
```

mExternalTMListener

javax.swing.event.TableModelListener mExternalTMListener

qbEditor
```
QBEditor qbEditor
```

Class org.ecoinformatics.seek.querybuilder.QBApplet extends javax.swing.JApplet implements Serializable

Class org.ecoinformatics.seek.querybuilder.QBSplitPaneAdvanced extends javax.swing.JPanel implements Serializable

Serialized Fields

mSplitPane
```
javax.swing.JSplitPane mSplitPane
```
mSchema
```
DSSchemaIFace mSchema
```
mDesktop
```
DBTableDesktopPane mDesktop
```
mTableJoins
```
DBTableJoin mTableJoins
```
mWherePanel
```
DBWherePanel mWherePanel
```
mSelectPanel
```
javax.swing.JPanel mSelectPanel
```
mTableView
```
DBSelectTableUIAdv mTableView
```
mTableModel
```
DBSelectTableModelAdv mTableModel
```
mAddBtn
```
javax.swing.JButton mAddBtn
```
mTableList
```
javax.swing.JList<E> mTableList
```

mTableModelListener

javax.swing.event.TableModelListener mTableModelListener

Class org.ecoinformatics.seek.querybuilder.QBSplitPaneIntermediate extends javax.swing.JPanel implements Serializable

Serialized Fields

mSplitPane
```
javax.swing.JSplitPane mSplitPane
```
mSchema
```
DSSchemaIFace mSchema
```
mDesktop
```
DBTableDesktopPane mDesktop
```
mTableJoins
```
DBTableJoin mTableJoins
```
mAddBtn
```
javax.swing.JButton mAddBtn
```
mTableList
```
javax.swing.JList<E> mTableList
```

mTableModelListener

javax.swing.event.TableModelListener mTableModelListener

mModelHash
```
java.util.Hashtable<K,V> mModelHash
```

mTablesViewHash

java.util.Hashtable<K,V> mTablesViewHash

mTableView
```
DBSelectTableUIStd mTableView
```
mTableModel
```
DBSelectTableModelStd mTableModel
```
mAllRadio
```
javax.swing.JRadioButton mAllRadio
```
mAnyRadio
```
javax.swing.JRadioButton mAnyRadio
```

Class org.ecoinformatics.seek.querybuilder.QBSplitPaneSQL extends javax.swing.JPanel implements Serializable
- Serialized Fields
  - mEditor
```
javax.swing.JEditorPane mEditor
```

Class org.ecoinformatics.seek.querybuilder.QBSplitPaneStandard extends javax.swing.JPanel implements Serializable

Serialized Fields

mSplitPane
```
javax.swing.JSplitPane mSplitPane
```
mSchema
```
DSSchemaIFace mSchema
```
mModelHash
```
java.util.Hashtable<K,V> mModelHash
```

mTablesViewHash

java.util.Hashtable<K,V> mTablesViewHash

mTableView
```
DBSelectTableUIStd mTableView
```
mTableModel
```
DBSelectTableModelStd mTableModel
```
mModel
```
DBSelectTableOverviewModel mModel
```

mSubTableView

DBSelectTableOverviewTable mSubTableView

mTableSchemaPane

javax.swing.JScrollPane mTableSchemaPane

mAllRadio
```
javax.swing.JRadioButton mAllRadio
```
mAnyRadio
```
javax.swing.JRadioButton mAnyRadio
```
mTableList
```
javax.swing.JList<E> mTableList
```
mUpperSplitPane
```
javax.swing.JSplitPane mUpperSplitPane
```
mUpperPanel
```
javax.swing.JPanel mUpperPanel
```
mSimulatedListPanel
```
javax.swing.JPanel mSimulatedListPanel
```
mSimulatedListList
```
javax.swing.JPanel mSimulatedListList
```
mSimulatedListAction
```
javax.swing.Action mSimulatedListAction
```
mCheckboxes
```
java.util.Vector<E> mCheckboxes
```

mTableModelListener

javax.swing.event.TableModelListener mTableModelListener

Package org.ecoinformatics.seek.sms
- Class org.ecoinformatics.seek.sms.IllegalLSIDAssignmentException extends java.lang.Exception implements Serializable
- Class org.ecoinformatics.seek.sms.IllegalLSIDException extends java.lang.Exception implements Serializable
Package org.geon
- Class org.geon.DBConnectionToken.DBConnectionType extends java.lang.Object implements Serializable
Package org.json
- Class org.json.JSONException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  0L
  - Serialized Fields
    - cause
```
java.lang.Throwable cause
```
Package org.kepler.authentication
- Class org.kepler.authentication.AuthenticationException extends java.lang.Exception implements Serializable
  - Serialized Fields
    - type
```
int type
```
Package org.kepler.authentication.gui
- Class org.kepler.authentication.gui.DomainSelectionGUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - OK
```
java.lang.String OK
```
    - CANCEL
```
java.lang.String CANCEL
```
    - domainField
```
javax.swing.JComboBox<E> domainField
```
- Class org.kepler.authentication.gui.GAMALoginGUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - OK
```
java.lang.String OK
```
    - RESET
```
java.lang.String RESET
```
    - userNameField
```
javax.swing.JTextField userNameField
```
    - passwordField
```
javax.swing.JPasswordField passwordField
```
    - domainField
```
javax.swing.JComboBox<E> domainField
```
- Class org.kepler.authentication.gui.LDAPLoginGUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - controllingDialog
```
javax.swing.JDialog controllingDialog
```
    - OK
```
java.lang.String OK
```
    - CANCEL
```
java.lang.String CANCEL
```
    - ANON
```
java.lang.String ANON
```
    - userNameField
```
javax.swing.JTextField userNameField
```
    - passwordField
```
javax.swing.JPasswordField passwordField
```
    - domainField
```
javax.swing.JComboBox<E> domainField
```
    - username
```
java.lang.String username
```
    - password
```
java.lang.String password
```
    - organization
```
java.lang.String organization
```
    - domainName
```
java.lang.String domainName
```
Package org.kepler.bio.stratosphere.input
- Class org.kepler.bio.stratosphere.input.FASTAInputFormat extends eu.stratosphere.api.java.record.io.FileInputFormat implements Serializable
  - Serialized Fields
    - readBuffer
```
byte[] readBuffer
```
    - wrapBuffer
```
byte[] wrapBuffer
```
    - readPos
```
int readPos
```
    - readPosIndex
```
long readPosIndex
```
    - seqIndex
```
int seqIndex
```
    - localSplitLength
```
long localSplitLength
```
    - partitionNumber
```
int partitionNumber
```
    - limit
```
int limit
```
    - delimiter
```
byte[] delimiter
```
    - overLimit
```
boolean overLimit
```
    - end
```
boolean end
```
    - bufferSize
```
int bufferSize
```
    - numLineSamples
```
int numLineSamples
```
    - seq_number
```
java.lang.Integer seq_number
```
    - readPosOffset
```
long readPosOffset
```
    - delimiter_position
```
java.lang.String delimiter_position
```
    - splitPath
```
eu.stratosphere.core.fs.Path splitPath
```
- Class org.kepler.bio.stratosphere.input.FASTAInputFormatBySize extends eu.stratosphere.api.java.record.io.FileInputFormat implements Serializable
  - Serialized Fields
    - keyClass
```
java.lang.Class<T> keyClass
```
    - valueClass
```
java.lang.Class<T> valueClass
```
    - readBuffer
```
byte[] readBuffer
```
    - wrapBuffer
```
byte[] wrapBuffer
```
    - readPos
```
int readPos
```
    - readPosIndex
```
long readPosIndex
```
    - localSplitLength
```
long localSplitLength
```
    - partitionNumber
```
int partitionNumber
```
    - limit
```
int limit
```
    - delimiter
```
byte[] delimiter
```
    - overLimit
```
boolean overLimit
```
    - end
```
boolean end
```
    - bufferSize
```
int bufferSize
```
    - numLineSamples
```
int numLineSamples
```
    - dataSize
```
java.lang.Float dataSize
```
    - readPosOffset
```
long readPosOffset
```
    - delimiter_position
```
java.lang.String delimiter_position
```
    - splitPath
```
eu.stratosphere.core.fs.Path splitPath
```
Package org.kepler.cloudsharing.gui
- Class org.kepler.cloudsharing.gui.CloudSharingConfigureAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
KeplerGraphFrame _parent
```
      The button for this action.
- Class org.kepler.cloudsharing.gui.ShareResultsToCloudDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - _uploadToSeedMe
```
javax.swing.JCheckBox _uploadToSeedMe
```
    - _uploadToDropbox
```
javax.swing.JCheckBox _uploadToDropbox
```
    - _title
```
javax.swing.JTextField _title
```
    - _desc
```
javax.swing.JTextField _desc
```
    - _license
```
javax.swing.JTextField _license
```
    - _credits
```
javax.swing.JTextField _credits
```
    - _shareWith
```
javax.swing.JTextField _shareWith
```
    - _privacyPrivateButton
```
javax.swing.JRadioButton _privacyPrivateButton
```
    - _privacyGroupButton
```
javax.swing.JRadioButton _privacyGroupButton
```
    - _privacyPublicButton
```
javax.swing.JRadioButton _privacyPublicButton
```
    - _userName
```
java.lang.String _userName
```
    - _licenseStr
```
java.lang.String _licenseStr
```
    - _parent
```
KeplerGraphFrame _parent
```
Package org.kepler.configuration
- Class org.kepler.configuration.ConfigurationManagerException extends java.lang.Exception implements Serializable
- Class org.kepler.configuration.NamespaceException extends java.lang.Exception implements Serializable
Package org.kepler.ddp.gui
- Class org.kepler.ddp.gui.ExecutionChoiceEditorPane extends javax.swing.JPanel implements Serializable
Package org.kepler.gis.data
- Class org.kepler.gis.data.BoundingBoxToken.BoundingBoxType extends java.lang.Object implements Serializable
- Class org.kepler.gis.data.GISToken.GISType extends java.lang.Object implements Serializable
- Class org.kepler.gis.data.RasterToken.RasterType extends java.lang.Object implements Serializable
- Class org.kepler.gis.data.VectorToken.VectorType extends java.lang.Object implements Serializable

Package org.kepler.gis.display

Class org.kepler.gis.display.ENMPCPFrame extends javax.swing.JFrame implements Serializable
- Serialized Fields
  - colors
```
java.awt.Color[] colors
```
  - pcp
```
edu.psu.geovista.datamining.vis.hd.HDClusterViewer_New pcp
```
  - rd
```
java.util.Random rd
```
Class org.kepler.gis.display.JumpFrame extends javax.swing.JFrame implements Serializable
- Serialized Fields
  - mapTab
```
JumpMapTab mapTab
```

Class org.kepler.gis.display.JumpMapTab extends javax.swing.JPanel implements Serializable

Serialized Fields

statusLabel
```
javax.swing.JLabel statusLabel
```

errorHandler

com.vividsolutions.jump.workbench.ui.ErrorHandler errorHandler

usrToolBar

org.kepler.gis.display.JumpMapTab.JumpToolBar usrToolBar

sysToolBar

com.vividsolutions.jump.workbench.ui.WorkbenchToolBar sysToolBar

layerManager

com.vividsolutions.jump.workbench.model.LayerManager layerManager

layerNamePanel

com.vividsolutions.jump.workbench.ui.TreeLayerNamePanel layerNamePanel

layerViewPanel

com.vividsolutions.jump.workbench.ui.LayerViewPanel layerViewPanel

toolbarPanel
```
javax.swing.JPanel toolbarPanel
```

context

com.vividsolutions.jump.workbench.WorkbenchContext context

Package org.kepler.gui
- Class org.kepler.gui.AboutAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.gui.AbstractDialogTab extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _target
```
NamedObj _target
```
    - _frame
```
TableauFrame _frame
```
    - _targetType
```
java.lang.String _targetType
```
- Class org.kepler.gui.ActorDialog extends TabbedDialog implements Serializable
  - Serialized Fields
    - generalTab
```
DialogGeneralTab generalTab
```
    - paramsTab
```
DialogParametersTab paramsTab
```
    - portsTab
```
DialogPortsTab portsTab
```
    - annotTab
```
DialogAnnotationsTab annotTab
```
    - unitsTab
```
DialogUnitsTab unitsTab
```
    - _actor
```
NamedObj _actor
```
- Class org.kepler.gui.ActorDialogAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - actorDialog
```
TabbedDialog actorDialog
```
- Class org.kepler.gui.AddRemoteRepositoryDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - okButton
```
javax.swing.JButton okButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - topPanel
```
javax.swing.JPanel topPanel
```
    - repositoryNameTextArea
```
javax.swing.JTextField repositoryNameTextArea
```
    - repositoryServerTextArea
```
javax.swing.JTextField repositoryServerTextArea
```
- Class org.kepler.gui.AnnotatedPTree extends PTree implements Serializable
  - Serialized Fields
    - listeners
```
java.util.Vector<E> listeners
```
    - parent
```
java.awt.Component parent
```
    - config
```
Configuration config
```
    - showRootIcon
```
boolean showRootIcon
```
    - isSearch
```
boolean isSearch
```
    - mouseListener
```
java.awt.event.MouseListener mouseListener
```
- Class org.kepler.gui.AuthenticateAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - actorDialog
```
TabbedDialog actorDialog
```
    - domainName
```
java.lang.String domainName
```
    - maxLoginAttempt
```
int maxLoginAttempt
```
    - authListener
```
AuthenticationListener authListener
```
- Class org.kepler.gui.AuthenticationWithDomainNameAction extends AuthenticateAction implements Serializable
- Class org.kepler.gui.BasicLibraryPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _name
```
java.lang.String _name
```
    - _library
```
javax.swing.JTree _library
```
    - _libraryScrollPane
```
javax.swing.JScrollPane _libraryScrollPane
```
    - _frame
```
TableauFrame _frame
```
- Class org.kepler.gui.ClassicViewPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _viewName
```
java.lang.String _viewName
```
    - _locations
```
java.util.Vector<E> _locations
```
    - _westEastSplitPane
```
javax.swing.JSplitPane _westEastSplitPane
```
    - _westSplitPane
```
javax.swing.JSplitPane _westSplitPane
```
    - _wtp
```
javax.swing.JTabbedPane _wtp
```
    - _etp
```
javax.swing.JTabbedPane _etp
```
- Class org.kepler.gui.ComponentLibraryPreferencesTab extends javax.swing.JPanel implements Serializable
  
  serialVersionUID:
  
  -5778742096181302681L
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
    - _newSource
```
javax.swing.JButton _newSource
```
    - _removeSource
```
javax.swing.JButton _removeSource
```
    - _defaultSources
```
javax.swing.JButton _defaultSources
```
    - _buildLibrary
```
javax.swing.JButton _buildLibrary
```
    - _sourceList
```
javax.swing.JTable _sourceList
```
    - _localRepoManager
```
LocalRepositoryManager _localRepoManager
```
      Keep a reference to the instance of LocalRepositoryManager for ease of use.
    - _repositoryManager
```
RepositoryManager _repositoryManager
```
      Keep a reference to the instance of RepositoryManager for ease of use.
- Class org.kepler.gui.ComponentLibraryPreferencesTab.ComponentSourceTableModel extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - columnNames
```
java.lang.String[] columnNames
```
    - searchSources
```
java.util.Vector<E> searchSources
```
    - saveSources
```
java.util.Vector<E> saveSources
```
    - sourceTypes
```
java.util.Vector<E> sourceTypes
```
    - sourceNames
```
java.util.Vector<E> sourceNames
```
    - sourceValues
```
java.util.Vector<E> sourceValues
```
- Class org.kepler.gui.ComponentLibraryTab extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _name
```
java.lang.String _name
```
    - _libraryModel
```
EntityTreeModel _libraryModel
```
    - _frame
```
TableauFrame _frame
```
      The configuration for this tableau.
    - _library
```
AnnotatedPTree _library
```
    - _libraryPanel
```
ResultTreeRebuilder _libraryPanel
```
    - _librarySearcher
```
SimpleLibrarySearcher _librarySearcher
```
    - _librarySearchPane
```
SimpleSearchUIPane _librarySearchPane
```
    - _searchButtonHandler
```
ComponentLibraryTab.SearchButtonActionHandler _searchButtonHandler
```
    - _ontSelectBox
```
javax.swing.JComboBox<E> _ontSelectBox
```
    - _ontSelectHandler
```
ComponentLibraryTab.OntSelectActionHandler _ontSelectHandler
```
    - _ontOpenIcon
```
javax.swing.ImageIcon _ontOpenIcon
```
    - _ontClosedIcon
```
javax.swing.ImageIcon _ontClosedIcon
```
    - _folOpenIcon
```
javax.swing.ImageIcon _folOpenIcon
```
    - _folClosedIcon
```
javax.swing.ImageIcon _folClosedIcon
```
    - _mouseListener
```
java.awt.event.MouseListener _mouseListener
```
    - _libraryActionHandler
```
ComponentLibraryTab.LibraryActionHandler _libraryActionHandler
```
    - allOntologiesName
```
java.lang.String allOntologiesName
```
    - _localRepoManager
```
LocalRepositoryManager _localRepoManager
```
- Class org.kepler.gui.ComponentLibraryTab.IconListRenderer extends javax.swing.DefaultListCellRenderer implements Serializable
- Class org.kepler.gui.ConfigureNamedObjAction extends ConfigureAction implements Serializable
  - Serialized Fields
    - _target
```
NamedObj _target
```
      The NamedObj to configure.
    - _frame
```
java.awt.Frame _frame
```
      The parent frame.
- Class org.kepler.gui.CookbookAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - DISPLAY_NAME
```
java.lang.String DISPLAY_NAME
```
    - TOOLTIP
```
java.lang.String TOOLTIP
```
    - LARGE_ICON
```
javax.swing.ImageIcon LARGE_ICON
```
    - MNEMONIC_KEY
```
java.lang.Integer MNEMONIC_KEY
```
    - ACCELERATOR_KEY
```
javax.swing.KeyStroke ACCELERATOR_KEY
```
    - COOKBOOK_URL_STR
```
java.lang.String COOKBOOK_URL_STR
```
    - parent
```
TableauFrame parent
```
- Class org.kepler.gui.DefaultViewPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _viewName
```
java.lang.String _viewName
```
    - _locations
```
java.util.Vector<E> _locations
```
    - _westEastSplitPane
```
javax.swing.JSplitPane _westEastSplitPane
```
    - _westSplitPane
```
javax.swing.JSplitPane _westSplitPane
```
    - _eastSplitPane
```
javax.swing.JSplitPane _eastSplitPane
```
    - _nwtp
```
javax.swing.JTabbedPane _nwtp
```
    - _netp
```
javax.swing.JTabbedPane _netp
```
    - _swtp
```
javax.swing.JTabbedPane _swtp
```
    - _setp
```
javax.swing.JTabbedPane _setp
```
- Class org.kepler.gui.DialogAnnotationsTab extends AbstractDialogTab implements Serializable
- Class org.kepler.gui.DialogGeneralTab extends AbstractDialogTab implements Serializable
  - Serialized Fields
    - cbName
```
javax.swing.JCheckBox cbName
```
    - cbNotes
```
javax.swing.JCheckBox cbNotes
```
    - cbPorts
```
javax.swing.JCheckBox cbPorts
```
    - noteTxtArea
```
javax.swing.JTextArea noteTxtArea
```
    - nameTxtFld
```
javax.swing.JTextField nameTxtFld
```
- Class org.kepler.gui.DialogParametersTab extends AbstractDialogTab implements Serializable
  - Serialized Fields
    - addButton
```
javax.swing.JButton addButton
```
    - delButton
```
javax.swing.JButton delButton
```
    - fmtButton
```
javax.swing.JButton fmtButton
```
    - rstButton
```
javax.swing.JButton rstButton
```
    - BUTTON_INSIDE_PADDING
```
javax.swing.plaf.InsetsUIResource BUTTON_INSIDE_PADDING
```
    - cbExpert
```
javax.swing.JCheckBox cbExpert
```
- Class org.kepler.gui.DialogPortsTab extends AbstractDialogTab implements Serializable
- Class org.kepler.gui.DialogUnitsTab extends AbstractDialogTab implements Serializable
- Class org.kepler.gui.DisplayWorkflowSizeStatisticsAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
      The parent frame.
- Class org.kepler.gui.DualVerticalViewPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _viewName
```
java.lang.String _viewName
```
    - _locations
```
java.util.Vector<E> _locations
```
    - _westEastSplitPane
```
javax.swing.JSplitPane _westEastSplitPane
```
    - _wtp
```
javax.swing.JTabbedPane _wtp
```
    - _etp
```
javax.swing.JTabbedPane _etp
```
- Class org.kepler.gui.GraphicalActorMetadata extends ActorMetadata implements Serializable
- Class org.kepler.gui.KeplerDocumentationEditorDialog extends ComponentDialog implements Serializable
- Class org.kepler.gui.KeplerEditorDropTarget extends EditorDropTarget implements Serializable
- Class org.kepler.gui.KeplerGraphFrame extends ActorGraphFrame implements Serializable
  - Serialized Fields
    - _canvasPanel
```
javax.swing.JPanel _canvasPanel
```
      A panel for the canvas.
    - _horizontalScrollBar
```
javax.swing.JScrollBar _horizontalScrollBar
```
      Horizontal scrollbar.
    - _horizontalScrollBarListener
```
KeplerGraphFrame.ScrollBarListener _horizontalScrollBarListener
```
      Listener for scrolling on the horizontal scroll bar.
    - _scrollBarFlag
```
boolean _scrollBarFlag
```
      Flag to determine whether to render scrollbars on the canvas.
    - _verticalScrollBar
```
javax.swing.JScrollBar _verticalScrollBar
```
      Vertical scrollbar.
    - _verticalScrollBarListener
```
KeplerGraphFrame.ScrollBarListener _verticalScrollBarListener
```
      Listener for scrolling on the vertical scroll bar.
- Class org.kepler.gui.LibrarySearchPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - searchButtonHandler
```
java.awt.event.ActionListener searchButtonHandler
```
- Class org.kepler.gui.LibrarySearchResultPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - library
```
PTree library
```
      the library for the result pane
    - results
```
LibrarySearchResults results
```
      the search results to display in the pane
- Class org.kepler.gui.LibrarySearchResults extends java.util.Vector implements Serializable
- Class org.kepler.gui.LoadParametersAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
- Class org.kepler.gui.NewActorFrame extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - parent
```
java.awt.Component parent
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - okButton
```
javax.swing.JButton okButton
```
    - actorNameLabel
```
javax.swing.JLabel actorNameLabel
```
    - classNameLabel
```
javax.swing.JLabel classNameLabel
```
    - introLabel1
```
javax.swing.JLabel introLabel1
```
    - introLabel2
```
javax.swing.JLabel introLabel2
```
    - introLabel3
```
javax.swing.JLabel introLabel3
```
    - introLabel4
```
javax.swing.JLabel introLabel4
```
    - actorNameTextField
```
javax.swing.JTextField actorNameTextField
```
    - classNameTextField
```
javax.swing.JTextField classNameTextField
```
    - listeners
```
java.util.Vector<E> listeners
```
- Class org.kepler.gui.NewFolderFrame extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - parent
```
java.awt.Component parent
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - okButton
```
javax.swing.JButton okButton
```
    - folderNameLabel
```
javax.swing.JLabel folderNameLabel
```
    - introLabel
```
javax.swing.JLabel introLabel
```
    - folderNameTextField
```
javax.swing.JTextField folderNameTextField
```
    - listeners
```
java.util.Vector<E> listeners
```
- Class org.kepler.gui.OntologyTreeCellRenderer extends PtolemyTreeCellRenderer implements Serializable
  - Serialized Fields
    - _ontIconClosed
```
javax.swing.ImageIcon _ontIconClosed
```
    - _ontIconOpen
```
javax.swing.ImageIcon _ontIconOpen
```
    - _generalIcon
```
javax.swing.ImageIcon _generalIcon
```
    - _searchIcon
```
javax.swing.ImageIcon _searchIcon
```
    - _folderIconClosed
```
javax.swing.ImageIcon _folderIconClosed
```
    - _folderIconOpen
```
javax.swing.ImageIcon _folderIconOpen
```
    - _packIconOpen
```
javax.swing.ImageIcon _packIconOpen
```
    - _packIconClosed
```
javax.swing.ImageIcon _packIconClosed
```
    - _packIconError
```
javax.swing.ImageIcon _packIconError
```
    - _remoteIcon
```
javax.swing.ImageIcon _remoteIcon
```
    - CAT_IMG
```
java.lang.String CAT_IMG
```
    - ONT_IMG_OPEN
```
java.lang.String ONT_IMG_OPEN
```
    - ONT_IMG_CLOSED
```
java.lang.String ONT_IMG_CLOSED
```
    - SEARCH_IMG
```
java.lang.String SEARCH_IMG
```
    - FOL_IMG_OPEN
```
java.lang.String FOL_IMG_OPEN
```
    - FOL_IMG_CLOSED
```
java.lang.String FOL_IMG_CLOSED
```
    - PACK_IMG_OPEN
```
java.lang.String PACK_IMG_OPEN
```
    - PACK_IMG_CLOSED
```
java.lang.String PACK_IMG_CLOSED
```
    - PACK_IMG_ERROR
```
java.lang.String PACK_IMG_ERROR
```
    - REMOTE_IMG
```
java.lang.String REMOTE_IMG
```
- Class org.kepler.gui.PlotsEditorPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - plotsPanel
```
javax.swing.JPanel plotsPanel
```
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - graphId
```
int graphId
```
- Class org.kepler.gui.PlotsPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _plots
```
java.util.List<E> _plots
```
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - scrollPane
```
javax.swing.JScrollPane scrollPane
```
    - panel
```
javax.swing.JPanel panel
```
- Class org.kepler.gui.PreferencesAction extends FigureAction implements Serializable
  - Serialized Fields
    - _initialOpenTab
```
java.lang.String _initialOpenTab
```
    - _parent
```
TableauFrame _parent
```
- Class org.kepler.gui.PreferencesFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _preferenceTabs
```
javax.swing.JTabbedPane _preferenceTabs
```
    - _controls
```
javax.swing.JPanel _controls
```
    - _okButton
```
javax.swing.JButton _okButton
```
    - _cancelButton
```
javax.swing.JButton _cancelButton
```
    - _width
```
int _width
```
    - _height
```
int _height
```
- Class org.kepler.gui.PreviewActorAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.gui.RemoveActorAction extends FigureAction implements Serializable
  - Serialized Fields
    - path
```
javax.swing.tree.TreePath path
```
    - parent
```
java.awt.Component parent
```
    - naFrame
```
NewActorFrame naFrame
```
- Class org.kepler.gui.RemoveComponentAction extends FigureAction implements Serializable
  - Serialized Fields
    - path
```
javax.swing.tree.TreePath path
```
    - parent
```
java.awt.Component parent
```
    - pFrame
```
PtolemyFrame pFrame
```
- Class org.kepler.gui.RemoveCustomKeplerDocumentationAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - _lsid
```
KeplerLSID _lsid
```
- Class org.kepler.gui.RenameComponentEntityAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
    - _obj
```
NamedObj _obj
```
- Class org.kepler.gui.ResultHighlighter extends LibrarySearchResultPane implements Serializable
- Class org.kepler.gui.ResultTreeRebuilder extends LibrarySearchResultPane implements Serializable
  - Serialized Fields
    - trimmedLibrary
```
VisibleTreeModel trimmedLibrary
```
    - resultsTree
```
PTree resultsTree
```
    - workspace
```
Workspace workspace
```
    - resultCounterPane
```
javax.swing.JPanel resultCounterPane
```
    - resultCounterLabel
```
javax.swing.JLabel resultCounterLabel
```
    - treeSingleSelectionlistener
```
javax.swing.event.TreeSelectionListener treeSingleSelectionlistener
```
- Class org.kepler.gui.RunWithFeedbackChkBoxAction extends FigureAction implements Serializable
  - Serialized Fields
    - DISPLAY_NAME
```
java.lang.String DISPLAY_NAME
```
    - TOOLTIP
```
java.lang.String TOOLTIP
```
    - LARGE_ICON
```
javax.swing.ImageIcon LARGE_ICON
```
    - MNEMONIC_KEY
```
java.lang.Integer MNEMONIC_KEY
```
    - ACCELERATOR_KEY
```
javax.swing.KeyStroke ACCELERATOR_KEY
```
    - FEEDBACK_ON_PTII_DISPLAY_NAME
```
java.lang.String FEEDBACK_ON_PTII_DISPLAY_NAME
```
    - FEEDBACK_OFF_PTII_DISPLAY_NAME
```
java.lang.String FEEDBACK_OFF_PTII_DISPLAY_NAME
```
    - FEEDBACK_ON_PTIIMENUPATH
```
java.lang.String FEEDBACK_ON_PTIIMENUPATH
```
    - FEEDBACK_OFF_PTIIMENUPATH
```
java.lang.String FEEDBACK_OFF_PTIIMENUPATH
```
    - jcbMenuItem
```
javax.swing.JCheckBoxMenuItem jcbMenuItem
```
    - feedbackOnAction
```
javax.swing.Action feedbackOnAction
```
    - feedbackOffAction
```
javax.swing.Action feedbackOffAction
```
- Class org.kepler.gui.SearchUIJPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - PANEL_WIDTH
```
int PANEL_WIDTH
```
    - BUTTON_DIMS
```
java.awt.Dimension BUTTON_DIMS
```
    - WIDE_BUTTON_DIMS
```
java.awt.Dimension WIDE_BUTTON_DIMS
```
    - BUTTON_INSIDE_PADDING
```
javax.swing.plaf.InsetsUIResource BUTTON_INSIDE_PADDING
```
    - searchValueField
```
javax.swing.JTextField searchValueField
```
    - borderTitle
```
java.lang.String borderTitle
```
    - titledBorder
```
javax.swing.border.Border titledBorder
```
    - searchAction
```
javax.swing.Action searchAction
```
    - cancelAction
```
javax.swing.Action cancelAction
```
    - sourceAction
```
javax.swing.Action sourceAction
```
    - advancedAction
```
javax.swing.Action advancedAction
```
    - searchButton
```
javax.swing.JButton searchButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - sourceButton
```
javax.swing.JButton sourceButton
```
    - advancedButton
```
javax.swing.JButton advancedButton
```
- Class org.kepler.gui.SemanticSearchDialogAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.gui.ShowDocumentationAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - pFrame
```
PtolemyFrame pFrame
```
    - _lsidToView
```
KeplerLSID _lsidToView
```
    - _path
```
javax.swing.tree.TreePath _path
```
- Class org.kepler.gui.SimpleSearchUIPane extends LibrarySearchPane implements Serializable
  - Serialized Fields
    - _searchUIJPanel
```
SearchUIJPanel _searchUIJPanel
```
- Class org.kepler.gui.SingleViewPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _viewName
```
java.lang.String _viewName
```
    - _locations
```
java.util.Vector<E> _locations
```
    - _ctp
```
javax.swing.JTabbedPane _ctp
```
- Class org.kepler.gui.SplashWindow extends javax.swing.JWindow implements Serializable
  - Serialized Fields
    - image
```
java.awt.Image image
```
      The splash image which is displayed on the splash window.
    - version
```
java.lang.String version
```
      The version number to be displayed in the window.
    - versionLabel
```
java.lang.String versionLabel
```
    - _statusMessage
```
java.lang.String _statusMessage
```
      The status message to be displayed on the splash window.
    - _versionFont
```
java.awt.Font _versionFont
```
      The version font.
    - _versionColor
```
java.awt.Color _versionColor
```
      The version color.
    - _statusFont
```
java.awt.Font _statusFont
```
      The status message font.
    - _statusColor
```
java.awt.Color _statusColor
```
      The status message color.
    - _progressBarColor
```
java.awt.Color _progressBarColor
```
      The color of the progress bar.
    - _splashLabel
```
javax.swing.JLabel _splashLabel
```
      The label containing the image, version text, and status.
    - _progress
```
int _progress
```
      The number of steps completed during initialization.
- Class org.kepler.gui.TabbedCompositeTabComponent extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _modelName
```
java.lang.String _modelName
```
    - _model
```
NamedObj _model
```
    - _closeButton
```
javax.swing.JButton _closeButton
```
    - _tableau
```
Tableau _tableau
```
    - _modelFullName
```
java.lang.String _modelFullName
```
- Class org.kepler.gui.TabbedDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - mainPanel
```
javax.swing.JPanel mainPanel
```
    - buttonPanel
```
javax.swing.JPanel buttonPanel
```
    - tabPane
```
javax.swing.JTabbedPane tabPane
```
    - okButton
```
javax.swing.JButton okButton
```
    - applyButton
```
javax.swing.JButton applyButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - helpButton
```
javax.swing.JButton helpButton
```
    - _frame
```
TableauFrame _frame
```
- Class org.kepler.gui.TabbedLookInsideAction extends LookInsideAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
      The containing frame.
    - _target
```
NamedObj _target
```
      The target to be opened.
- Class org.kepler.gui.TabPaneExtensionExample extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
- Class org.kepler.gui.ToggleAllPortNamesAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
      The parent frame.
- Class org.kepler.gui.TreeAction extends FigureAction implements Serializable
  - Serialized Fields
    - path
```
javax.swing.tree.TreePath path
```
    - parent
```
java.awt.Component parent
```
    - listeners
```
java.util.Vector<E> listeners
```
- Class org.kepler.gui.WelcomeScreen extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - keplerLogoURL
```
java.lang.String keplerLogoURL
```
    - startupCheck
```
javax.swing.JCheckBox startupCheck
```
    - close
```
javax.swing.JButton close
```
    - scientistLink
```
javax.swing.JLabel scientistLink
```
    - programmerLink
```
javax.swing.JLabel programmerLink
```
- Class org.kepler.gui.WorkflowOutlinePanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - wotm
```
SubsetWorkflowOutlineTreeModel wotm
```
    - togglePorts
```
javax.swing.JCheckBox togglePorts
```
    - toggleRelations
```
javax.swing.JCheckBox toggleRelations
```
    - toggleAttributes
```
javax.swing.JCheckBox toggleAttributes
```
    - includeAttributeCheckBox
```
boolean includeAttributeCheckBox
```
    - includePortsCheckBox
```
boolean includePortsCheckBox
```
    - includeRelationsCheckBox
```
boolean includeRelationsCheckBox
```
    - _mouseListener
```
java.awt.event.MouseListener _mouseListener
```
    - _ptree
```
AnnotatedPTree _ptree
```
    - _searchTerm
```
java.lang.String _searchTerm
```
- Class org.kepler.gui.WorkflowOutlineTabPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
    - _outlinePanel
```
WorkflowOutlinePanel _outlinePanel
```
      The outline panel object.
    - _searchUIJPanel
```
SearchUIJPanel _searchUIJPanel
```
      The search panel.
- Class org.kepler.gui.WorkflowTypeCheckerDialogAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
Package org.kepler.gui.component
- Class org.kepler.gui.component.OpenCompositeAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - lsidToOpen
```
KeplerLSID lsidToOpen
```
    - _namedObjToOpen
```
NamedObj _namedObjToOpen
```
      A NamedObj to open.
    - _path
```
java.lang.String _path
```
      The path of a MoML file to open.
    - _parser
```
MoMLParser _parser
```
      MoMLParser to parse a MoML file.
- Class org.kepler.gui.component.SearchConfigurationFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _cbPane
```
javax.swing.JPanel _cbPane
```
    - cbName
```
javax.swing.JCheckBox cbName
```
    - cbClassName
```
javax.swing.JCheckBox cbClassName
```
    - cbOntName
```
javax.swing.JCheckBox cbOntName
```
    - cbOntClassName
```
javax.swing.JCheckBox cbOntClassName
```
    - cbFolderName
```
javax.swing.JCheckBox cbFolderName
```
    - cbKarName
```
javax.swing.JCheckBox cbKarName
```
    - cbLocalRepo
```
javax.swing.JCheckBox cbLocalRepo
```
    - _controls
```
javax.swing.JPanel _controls
```
    - _okButton
```
javax.swing.JButton _okButton
```
    - _cancelButton
```
javax.swing.JButton _cancelButton
```
    - _LibSearchConfig
```
LibSearchConfiguration _LibSearchConfig
```
Package org.kepler.gui.frame
- Class org.kepler.gui.frame.CaseGraphTableau.AddCaseAction extends MultiCompositeTableau.AddRefinementAction implements Serializable
- Class org.kepler.gui.frame.MultiCompositeTableau.AddRefinementAction extends FigureAction implements Serializable
  - Serialized Fields
    - _refinementTypeName
```
java.lang.String _refinementTypeName
```
      The type of the sub-workflow.
    - _nameQuery
```
java.lang.String _nameQuery
```
      The string displayed in the dialog.
    - _title
```
java.lang.String _title
```
      The title of the window.
- Class org.kepler.gui.frame.MultiCompositeTableau.RemoveRefinementAction extends FigureAction implements Serializable
  - Serialized Fields
    - _refinementTypeName
```
java.lang.String _refinementTypeName
```
      The type of sub-workflow.
    - _refinementTypePluralName
```
java.lang.String _refinementTypePluralName
```
      The plural of the type of sub-workflow.
- Class org.kepler.gui.frame.TabbedKeplerGraphFrame extends KeplerGraphFrame implements Serializable
  - Serialized Fields
    - _panel
```
javax.swing.JPanel _panel
```
      The root panel. This contains either a single JGraph if no composite actors have been opened, or _tabbedPane, which contains a tab for each open composite actor. NOTE: do not assign it null here since the assignment happens after the constructor which creates it in _createRightComponent().
    - _tabbedPane
```
javax.swing.JTabbedPane _tabbedPane
```
      The tabbed pane for composites. This is null if no composite actors have been opened.
    - _rootComposite
```
CompositeEntity _rootComposite
```
      The composite actor for which this frame was opened.
    - _rootTableau
```
TabbedKeplerGraphTableau _rootTableau
```
      The tableau for which this frame was opened.
    - _modelManager
```
ModelToFrameManager _modelManager
```
      Model to frame mapping.
- Class org.kepler.gui.frame.TabbedKeplerGraphFrameEvent extends StateChangeEvent implements Serializable
  - Serialized Fields
    - _frame
```
TabbedKeplerGraphFrame _frame
```
      The frame in which the state change occurs.
Package org.kepler.gui.kar
- Class org.kepler.gui.kar.ActorUploaderAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
- Class org.kepler.gui.kar.DeleteArchiveAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - archiveFile
```
java.io.File archiveFile
```
- Class org.kepler.gui.kar.DownloadKARFileAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - entityLibrary
```
DownloadableKAREntityLibrary entityLibrary
```
- Class org.kepler.gui.kar.ExportActorArchiveAction extends ExportArchiveAction implements Serializable
- Class org.kepler.gui.kar.ExportArchiveAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
    - _saveSucceeded
```
boolean _saveSucceeded
```
    - _savekar
```
SaveKAR _savekar
```
      The SaveKAR object is a GUI free helper class for saving KARs.
    - _karType
```
java.lang.String _karType
```
      A string that represents to the user the type of KAR that is being exported. This string may appear in dialog messages to allow different callers to better identify to the user what the contents of this KAR file are. This should be the first thing set in the handleType method of any subclasses of this class but is not required.
    - refreshFrameAfterSave
```
boolean refreshFrameAfterSave
```
    - _mapKARToCurrentFrame
```
boolean _mapKARToCurrentFrame
```
    - _singleItemKAR
```
boolean _singleItemKAR
```
      The purpose of KARs are for grouping things together. Sometimes though we have only one thing in a KAR which changes some things. This is a bit confusing here because this refers to a single item being saved from the user perspective. Just because we're saving a single item at this stage does not mean there will only be one file in the KAR. There may be other files associated with the single item that we're saving from this class. For example we may be saving a single workflow that has many files associated with it.
    - _defaultFileName
```
java.lang.String _defaultFileName
```
    - _overrideModuleDependencies
```
java.lang.String _overrideModuleDependencies
```
    - _upload
```
boolean _upload
```
    - _saveFile
```
java.io.File _saveFile
```
    - _nonInteractiveSave
```
boolean _nonInteractiveSave
```
    - _workflow
```
ComponentEntity<T extends ComponentPort> _workflow
```
      The workflow associated with the parent frame.
    - _localRepositoryManager
```
LocalRepositoryManager _localRepositoryManager
```
      Convenience reference to the LocalRepositoryManager.
    - useTempFile
```
boolean useTempFile
```
      prevent the file chooser from displaying and just use a temp file
- Class org.kepler.gui.kar.ImportModuleDependenciesAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - _archiveFile
```
java.io.File _archiveFile
```
    - _updateHistoryAndLastDirectory
```
boolean _updateHistoryAndLastDirectory
```
    - _karXml
```
KarXml _karXml
```
    - _dependencies
```
java.util.List<E> _dependencies
```
    - _exportMode
```
boolean _exportMode
```
    - _needToDoAForceExport
```
boolean _needToDoAForceExport
```
    - _downloadLock
```
java.lang.Object _downloadLock
```
- Class org.kepler.gui.kar.KarManifestViewer extends javax.swing.JFrame implements Serializable
  
  serialVersionUID:
  
  -739762970203187753L
  - Serialized Fields
    - _karFile
```
KARFile _karFile
```
    - _lsidField
```
javax.swing.JTextField _lsidField
```
    - _manifestField
```
javax.swing.JTextArea _manifestField
```
    - _manifestScrollPane
```
javax.swing.JScrollPane _manifestScrollPane
```
- Class org.kepler.gui.kar.KARPreferencesTab extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _KARPrefPanel
```
javax.swing.JPanel _KARPrefPanel
```
    - _tabName
```
java.lang.String _tabName
```
    - cman
```
ConfigurationManager cman
```
    - coreProperty
```
ConfigurationProperty coreProperty
```
    - KARComplianceProp
```
ConfigurationProperty KARComplianceProp
```
    - lastUserComplianceSetting
```
java.lang.String lastUserComplianceSetting
```
- Class org.kepler.gui.kar.KarUploaderAction extends FigureAction implements Serializable
  - Serialized Fields
    - archiveFileToUpload
```
java.io.File archiveFileToUpload
```
    - _parent
```
TableauFrame _parent
```
- Class org.kepler.gui.kar.OpenArchiveAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - archiveFileToOpen
```
java.io.File archiveFileToOpen
```
    - updateHistoryAndLastDirectory
```
boolean updateHistoryAndLastDirectory
```
    - actionEvent
```
java.awt.event.ActionEvent actionEvent
```
    - _openException
```
java.lang.Exception _openException
```
      The exception generated when trying to open the KAR.
- Class org.kepler.gui.kar.RefreshFolderAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - _folder
```
java.io.File _folder
```
- Class org.kepler.gui.kar.SaveArchiveAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
- Class org.kepler.gui.kar.ViewManifestAction extends FigureAction implements Serializable
  
  serialVersionUID:
  
  4476849345160344931L
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - archiveFileToOpen
```
java.io.File archiveFileToOpen
```
Package org.kepler.gui.lsid
- Class org.kepler.gui.lsid.LibLsidViewerAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
    - _lsidToView
```
KeplerLSID _lsidToView
```
- Class org.kepler.gui.lsid.LSIDViewer extends javax.swing.JFrame implements Serializable
  
  serialVersionUID:
  
  3894368355858308419L
  - Serialized Fields
    - _no
```
NamedObj _no
```
    - _lsidField
```
javax.swing.JTextField _lsidField
```
    - _derivedFromField
```
javax.swing.JTextArea _derivedFromField
```
    - _derivedFromScrollPane
```
javax.swing.JScrollPane _derivedFromScrollPane
```
    - _editingEnabled
```
boolean _editingEnabled
```
- Class org.kepler.gui.lsid.LSIDViewerAction extends FigureAction implements Serializable
  - Serialized Fields
    - _parent
```
TableauFrame _parent
```
    - _obj
```
NamedObj _obj
```
Package org.kepler.gui.memory
- Class org.kepler.gui.memory.JvmMemoryDialogAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.gui.memory.JvmMemoryPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - minMemoryField
```
javax.swing.JTextField minMemoryField
```
    - maxMemoryField
```
javax.swing.JTextField maxMemoryField
```
    - stackSizeField
```
javax.swing.JTextField stackSizeField
```
    - buttonOK
```
javax.swing.JButton buttonOK
```
    - buttonCancel
```
javax.swing.JButton buttonCancel
```
    - owner
```
javax.swing.JDialog owner
```
Package org.kepler.gui.popups
- Class org.kepler.gui.popups.DownloadableKARPopup extends NoLiidLibraryPopup implements Serializable
- Class org.kepler.gui.popups.FolderPopup extends LibraryPopup implements Serializable
- Class org.kepler.gui.popups.KARComponentPopup extends LibraryPopup implements Serializable
  
  serialVersionUID:
  
  1404026700541313696L
- Class org.kepler.gui.popups.KARErrorPopup extends LibraryPopup implements Serializable
- Class org.kepler.gui.popups.KARFolderPopup extends LibraryPopup implements Serializable
- Class org.kepler.gui.popups.KARPopup extends LibraryPopup implements Serializable
  
  serialVersionUID:
  
  4797725289324539443L
- Class org.kepler.gui.popups.LibraryPopup extends javax.swing.JPopupMenu implements Serializable
  
  serialVersionUID:
  
  -5556895608334936467L
  - Serialized Fields
    - _selectionPath
```
javax.swing.tree.TreePath _selectionPath
```
    - _parentFrame
```
PtolemyFrame _parentFrame
```
    - _liid
```
int _liid
```
- Class org.kepler.gui.popups.NoLiidLibraryPopup extends javax.swing.JPopupMenu implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - _selectionPath
```
javax.swing.tree.TreePath _selectionPath
```
    - _parentFrame
```
PtolemyFrame _parentFrame
```
    - _liid
```
int _liid
```
- Class org.kepler.gui.popups.OntologyComponentPopup extends LibraryPopup implements Serializable
- Class org.kepler.gui.popups.OntologyPopup extends LibraryPopup implements Serializable
- Class org.kepler.gui.popups.OutlineComponentPopup extends NoLiidLibraryPopup implements Serializable
- Class org.kepler.gui.popups.RemoteKARErrorPopup extends NoLiidLibraryPopup implements Serializable
- Class org.kepler.gui.popups.RemoteOntologyComponentPopup extends NoLiidLibraryPopup implements Serializable
Package org.kepler.gui.state
- Class org.kepler.gui.state.ReportingStateChangeEvent extends StateChangeEvent implements Serializable
  - Serialized Fields
    - reportInstance
```
ReportInstance reportInstance
```
- Class org.kepler.gui.state.StateChangeEvent extends javax.swing.event.ChangeEvent implements Serializable
  - Serialized Fields
    - changedState
```
java.lang.String changedState
```
    - reference
```
NamedObj reference
```
- Class org.kepler.gui.state.ViewStateChangeEvent extends StateChangeEvent implements Serializable
  - Serialized Fields
    - viewName
```
java.lang.String viewName
```
Package org.kepler.job
- Class org.kepler.job.JobException extends java.lang.Exception implements Serializable
- Class org.kepler.job.NotSupportedException extends java.lang.Exception implements Serializable
Package org.kepler.kar
- Class org.kepler.kar.KARAlreadyCachedException extends java.lang.Exception implements Serializable
- Class org.kepler.kar.KARFile extends java.util.jar.JarFile implements Serializable
  
  serialVersionUID:
  
  1522142700198331341L
  - Serialized Fields
    - _supportedVersions
```
java.util.Vector<E> _supportedVersions
```
      This is the list of all supported versions.
    - _fileOnDisk
```
java.io.File _fileOnDisk
```
      If the KARFile object was created from a KARFile on disk this is the File path and name of that file.
    - _lsidTypes
```
java.util.Hashtable<K,V> _lsidTypes
```
      A list of all the entry types contained in this KARFile indexed by LSID.
    - _lsidNames
```
java.util.Hashtable<K,V> _lsidNames
```
      A list of all the entry names contained in this KARFile indexed by LSID.
Package org.kepler.modulemanager
- Class org.kepler.modulemanager.ActiveModulesDocumentationPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - activeModulesListLabel
```
javax.swing.JLabel activeModulesListLabel
```
    - activeModulesList
```
javax.swing.JList<E> activeModulesList
```
    - activeModulesListScrollPane
```
javax.swing.JScrollPane activeModulesListScrollPane
```
    - extension
```
java.lang.String extension
```
    - modulename
```
java.lang.String modulename
```
    - tmpfl
```
java.io.File tmpfl
```
    - docFilePath
```
java.lang.String docFilePath
```
    - basePath
```
java.lang.String basePath
```
    - cman
```
ConfigurationManager cman
```
- Class org.kepler.modulemanager.ModuleDocumentationManagerAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.modulemanager.ModuleDocumentationManagerPane extends javax.swing.JTabbedPane implements Serializable
Package org.kepler.modulemanager.gui
- Class org.kepler.modulemanager.gui.AvailableModulesPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - suitesLabel
```
javax.swing.JLabel suitesLabel
```
    - suitesList
```
SuitesList suitesList
```
    - suitesListScrollPane
```
javax.swing.JScrollPane suitesListScrollPane
```
    - suitesLabelToolTip
```
java.lang.String suitesLabelToolTip
```
    - showSuitePatchesCheckBox
```
javax.swing.JCheckBox showSuitePatchesCheckBox
```
    - modulesLabel
```
javax.swing.JLabel modulesLabel
```
    - modulesList
```
ModulesList modulesList
```
    - modulesListScrollPane
```
javax.swing.JScrollPane modulesListScrollPane
```
    - modulesLabelToolTip
```
java.lang.String modulesLabelToolTip
```
    - showTestReleasesCheckBox
```
javax.swing.JCheckBox showTestReleasesCheckBox
```
    - selectedLabel
```
javax.swing.JLabel selectedLabel
```
    - selectedModulesList
```
javax.swing.JList<E> selectedModulesList
```
    - selectedModulesListScrollPane
```
javax.swing.JScrollPane selectedModulesListScrollPane
```
    - selectedLabelToolTip
```
java.lang.String selectedLabelToolTip
```
    - restartButton
```
javax.swing.JButton restartButton
```
    - cancelButton
```
javax.swing.JButton cancelButton
```
    - selectButton
```
javax.swing.JButton selectButton
```
    - unselectButton
```
javax.swing.JButton unselectButton
```
    - upButton
```
javax.swing.JButton upButton
```
    - downButton
```
javax.swing.JButton downButton
```
    - downloader
```
ModuleDownloader downloader
```
    - shouldCheckForPatchesCheckBox
```
javax.swing.JCheckBox shouldCheckForPatchesCheckBox
```
    - checkForPatchesNowButton
```
javax.swing.JButton checkForPatchesNowButton
```
    - rollbackKeplerButton
```
javax.swing.JButton rollbackKeplerButton
```
- Class org.kepler.modulemanager.gui.CurrentSuitePanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - currentSuiteListLabel
```
javax.swing.JLabel currentSuiteListLabel
```
    - currentSuiteList
```
javax.swing.JList<E> currentSuiteList
```
    - activeModulesListScrollPane
```
javax.swing.JScrollPane activeModulesListScrollPane
```
    - saveConfiguration
```
javax.swing.JButton saveConfiguration
```
    - loadConfiguration
```
javax.swing.JButton loadConfiguration
```
    - downloader
```
ModuleDownloader downloader
```
- Class org.kepler.modulemanager.gui.DownloadedModulesPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - downloadedModulesListLabel
```
javax.swing.JLabel downloadedModulesListLabel
```
    - downloadedModulesList
```
javax.swing.JList<E> downloadedModulesList
```
    - downloadedModulesListScollPane
```
javax.swing.JScrollPane downloadedModulesListScollPane
```
- Class org.kepler.modulemanager.gui.ModuleManagerAction extends FigureAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.modulemanager.gui.ModuleManagerPane extends javax.swing.JTabbedPane implements Serializable
- Class org.kepler.modulemanager.gui.ModulesList extends javax.swing.JList implements Serializable
- Class org.kepler.modulemanager.gui.SuitesList extends javax.swing.JList implements Serializable
  - Serialized Fields
    - fullList
```
java.util.List<E> fullList
```
    - patchableOnlyList
```
java.util.List<E> patchableOnlyList
```
    - shouldShowFullList
```
boolean shouldShowFullList
```
Package org.kepler.modulemanager.gui.patch
- Class org.kepler.modulemanager.gui.patch.UpgradeDialogPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - upgradeList
```
java.util.List<E> upgradeList
```
    - intro
```
javax.swing.JLabel intro
```
    - upgradeJList
```
javax.swing.JList<E> upgradeJList
```
    - upgradeScrollPane
```
javax.swing.JScrollPane upgradeScrollPane
```
    - question
```
javax.swing.JLabel question
```
    - yes
```
javax.swing.JButton yes
```
    - no
```
javax.swing.JButton no
```
Package org.kepler.objectmanager
- Class org.kepler.objectmanager.ActorMetadata extends java.lang.Object implements Serializable
  - Serialized Fields
    - _classId
```
java.lang.String _classId
```
      The id of the class that implements this actor.
    - _className
```
java.lang.String _className
```
      The java class name. For composites, this is the name of the xml file like org.kepler.actor.MyCompositeActor
    - _internalClassName
```
java.lang.String _internalClassName
```
      The class name as represented in ptII. For composites, this is always ptolemy.actor.TypedCompositeActor. For java classes, this is the name of the java class.
    - _actorId
```
java.lang.String _actorId
```
      The id of the actor.
    - _actorName
```
java.lang.String _actorName
```
      The name of the actor
    - _actor
```
NamedObj _actor
```
      The instantiation of the actor. TODO describe more about how/when this is populated, etc.
    - _isClass
```
boolean _isClass
```
      True if the actor described by this ActorMetadata is a class description.
    - _dependencyVector
```
java.util.Vector<E> _dependencyVector
```
      dependency ids
    - _semanticTypeVector
```
java.util.Vector<E> _semanticTypeVector
```
      semantic types
    - _portVector
```
java.util.Vector<E> _portVector
```
      ports
    - _changed
```
boolean _changed
```
      changed flag
    - _attributeVector
```
java.util.Vector<E> _attributeVector
```
      attribute vector for generic attributes
    - _relationVector
```
java.util.Vector<E> _relationVector
```
      vector for relations in a composite
    - _links
```
java.lang.String _links
```
    - _metadataHandlerVector
```
java.util.Vector<E> _metadataHandlerVector
```
- Class org.kepler.objectmanager.InvalidMetadataException extends java.lang.Exception implements Serializable
Package org.kepler.objectmanager.cache
- Class org.kepler.objectmanager.cache.ActorCacheObject extends CacheObject implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      deserialize this class
      
      Throws:
      
      java.io.IOException - Description of the Exception
      
      java.lang.ClassNotFoundException - Description of the Exception
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      serialize this class
      
      Throws:
      
      java.io.IOException - Description of the Exception
- Class org.kepler.objectmanager.cache.BufferedDataCacheObject extends DataCacheObject implements Serializable
- Class org.kepler.objectmanager.cache.CacheException extends java.lang.Exception implements Serializable
- Class org.kepler.objectmanager.cache.CacheObject extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -3774217914823785296L
  - Serialized Fields
    - _semanticTypes
```
java.util.Vector<E> _semanticTypes
```
    - _attributes
```
java.util.Hashtable<K,V> _attributes
```
- Class org.kepler.objectmanager.cache.DataCacheFileObject extends DataCacheObject implements Serializable
  - Serialized Fields
    - mFileLoc
```
int mFileLoc
```
- Class org.kepler.objectmanager.cache.DataCacheObject extends CacheObject implements Serializable
  - Serialization Methods
    - readObject
```
private void readObject(java.io.ObjectInputStream ois)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException
```
      Custom deserialization method. Need to initialize mListeners to empty vector.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
  - Serialized Fields
    - mCreatedDate
```
java.util.Date mCreatedDate
```
      Description of the Field
    - mResourceName
```
java.lang.String mResourceName
```
      Description of the Field
    - mLocalFileName
```
java.lang.String mLocalFileName
```
      Absolute filename of data file.
    - mStatus
```
int mStatus
```
      Description of the Field
- Class org.kepler.objectmanager.cache.RawDataCacheObject extends CacheObject implements Serializable
  - Serialized Fields
    - datafile
```
java.io.File datafile
```
- Class org.kepler.objectmanager.cache.ReportLayoutCacheObject extends CacheObject implements Serializable
  - Serialized Fields
    - reportLayout
```
ReportLayout reportLayout
```
- Class org.kepler.objectmanager.cache.WorkflowRunCacheObject extends CacheObject implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Throws:
      
      java.io.IOException
Package org.kepler.objectmanager.cache.browser
- Class org.kepler.objectmanager.cache.browser.CacheViewerTabPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
    - _refreshButton
```
javax.swing.JButton _refreshButton
```
    - _cacheList
```
javax.swing.JTable _cacheList
```
Package org.kepler.objectmanager.data
- Class org.kepler.objectmanager.data.DataSourceInstanceController.GetDSDocumentationAction extends FigureAction implements Serializable
- Class org.kepler.objectmanager.data.DataSrcProgressFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _msgText
```
javax.swing.JLabel _msgText
```
    - _progressBar
```
javax.swing.JProgressBar _progressBar
```
- Class org.kepler.objectmanager.data.UnresolvableTypeException extends java.lang.Exception implements Serializable
Package org.kepler.objectmanager.data.db
- Class org.kepler.objectmanager.data.db.QBEditor extends TableauFrame implements Serializable
  - Serialized Fields
    - _scrollPane
```
javax.swing.JScrollPane _scrollPane
```
      The scroll pane containing the text area.
    - _qbApp
```
QBApp _qbApp
```
    - _factory
```
QBTableauFactory _factory
```
    - _sqlAttr
```
StringAttribute _sqlAttr
```
    - _schemaAttr
```
StringAttribute _schemaAttr
```
    - _title
```
java.lang.String _title
```
    - _needPopDialog
```
boolean _needPopDialog
```
    - _fromCancel
```
boolean _fromCancel
```
- Class org.kepler.objectmanager.data.db.UnWellFormedConstraintException extends java.lang.Exception implements Serializable
Package org.kepler.objectmanager.library
- Class org.kepler.objectmanager.library.LibSearchConfiguration extends java.lang.Object implements Serializable
  - Serialized Fields
    - _searchTypes
```
java.util.Vector<E> _searchTypes
```
    - _saveFileName
```
java.lang.String _saveFileName
```
Package org.kepler.objectmanager.lsid
- Class org.kepler.objectmanager.lsid.KeplerLSID extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  6124781256944559026L
  - Serialization Methods
    - readObject
```
private void readObject(java.io.ObjectInputStream ois)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException
```
      Custom deserialization method. The serial representation of the KeplerLSID object is simply the toString() representation. This string representation is passed into the initializeFromString method.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeObject
```
private void writeObject(java.io.ObjectOutputStream oos)
                  throws java.io.IOException
```
      Custom serialization method. The serial representation of the KeplerLSID object is simply the toString() representation.
      
      Throws:
      
      java.io.IOException
  - Serialization Overview
    - Define custom metadata representation consisting of a single String named "lsidString"
Package org.kepler.objectmanager.repository
- Class org.kepler.objectmanager.repository.RepositoryException extends java.lang.Exception implements Serializable
Package org.kepler.plotting
- Class org.kepler.plotting.DataTable extends javax.swing.JTable implements Serializable
  - Serialized Fields
    - pointTypeChoices
```
javax.swing.JComboBox<E> pointTypeChoices
```
    - plotEditor
```
PlotEditor plotEditor
```
    - plottingController
```
PlottingController plottingController
```
    - popupMenu
```
javax.swing.JPopupMenu popupMenu
```
    - removeRowMenuItem
```
javax.swing.JMenuItem removeRowMenuItem
```
- Class org.kepler.plotting.GraphLabelsPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - labels
```
java.util.Map<K,V> labels
```
    - textFields
```
java.util.Map<K,V> textFields
```
    - plotEditor
```
PlotEditor plotEditor
```
- Class org.kepler.plotting.Plot extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - added
```
boolean added
```
    - toggleMenu
```
javax.swing.JMenu toggleMenu
```
    - frozenSeries
```
java.util.Set<E> frozenSeries
```
    - chart
```
org.jfree.chart.JFreeChart chart
```
    - plot
```
org.jfree.chart.plot.XYPlot plot
```
    - demoSeries
```
org.jfree.data.time.TimePeriodValues demoSeries
```
    - dataset
```
org.jfree.data.time.TimePeriodValuesCollection dataset
```
    - panel
```
javax.swing.JPanel panel
```
    - chartPanel
```
org.jfree.chart.ChartPanel chartPanel
```
    - plotEditor
```
PlotEditor plotEditor
```
    - clearButton
```
javax.swing.JButton clearButton
```
- Class org.kepler.plotting.PlotEditor extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - editorPanel
```
PlotsEditorPanel editorPanel
```
    - active
```
boolean active
```
    - deleteButton
```
javax.swing.JButton deleteButton
```
    - graphLabelsPanel
```
GraphLabelsPanel graphLabelsPanel
```
    - table
```
DataTable table
```
    - tbp
```
TableButtonPanel tbp
```
    - plot
```
Plot plot
```
- Class org.kepler.plotting.TableButtonPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - plotEditor
```
PlotEditor plotEditor
```
Package org.kepler.profiling.gui
- Class org.kepler.profiling.gui.ActorFireOutlineTabPane extends WorkflowRunOutlineTabPane implements Serializable
  - Serialized Fields
    - _wfOutlineTreeModel
```
WorkflowOutlineTreeActorFireModel _wfOutlineTreeModel
```
- Class org.kepler.profiling.gui.AnnotatedActorFirePTree extends AnnotatedPTree implements Serializable
- Class org.kepler.profiling.gui.AnnotatedActorIOPTree extends AnnotatedPTree implements Serializable
- Class org.kepler.profiling.gui.CurrentExecutionPanel extends ExecutionMonitorPanel implements Serializable
- Class org.kepler.profiling.gui.ExecutionMonitorPanel extends ViewWatchingTabPane implements Serializable
  - Serialized Fields
    - _workflow
```
CompositeActor _workflow
```
      The workflow object.
    - _executionMonitorRecording
```
ExecutionMonitorPanel.ExecutionMonitorRecording _executionMonitorRecording
```
      The recording class that updates the table.
    - _statusLabel
```
javax.swing.JLabel _statusLabel
```
      Status label at the bottom of the table.
    - _useCurrentTimeForElapsed
```
boolean _useCurrentTimeForElapsed
```
      If true, the current time can be used to calculate the elapsed execution time of an actor.
    - _executionTableContextMenu
```
javax.swing.JPopupMenu _executionTableContextMenu
```
      Context menu for execution table.
    - _executionTable
```
javax.swing.JTable _executionTable
```
      The execution table.
    - _executionTableModel
```
javax.swing.table.AbstractTableModel _executionTableModel
```
      The execution table model.
    - _actorsInfo
```
java.util.Map<K,V> _actorsInfo
```
    - _actorsList
```
java.util.List<E> _actorsList
```
    - _separateActorExecutions
```
boolean _separateActorExecutions
```
      If true, a new row is created for each actor firing in the execution table.
    - _showCompositeActorExecutions
```
boolean _showCompositeActorExecutions
```
      If true, a new row is created in the execution table for each composite actor firing.
    - _selectedRow
```
int _selectedRow
```
      Index of selected row in the execution table.
    - _updateFrequency
```
int _updateFrequency
```
      How often (in milliseconds) to update the execution table.
    - _replayButton
```
javax.swing.JButton _replayButton
```
      Button for replay.
    - _isRunning
```
java.util.concurrent.atomic.AtomicBoolean _isRunning
```
      True when the workflow is executing.
- Class org.kepler.profiling.gui.ExecutionPanelConfigureDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - _delayField
```
javax.swing.JTextField _delayField
```
      The amount of time to delay updating the table.
- Class org.kepler.profiling.gui.PortIOOutlineTabPane extends WorkflowRunOutlineTabPane implements Serializable
  - Serialized Fields
    - _wfOutlineTreeModel
```
WorkflowOutlineTreeModel _wfOutlineTreeModel
```
- Class org.kepler.profiling.gui.PreviousExecutionPanel extends ExecutionMonitorPanel implements Serializable
  - Serialized Fields
    - _workflowRunManager
```
WorkflowRunManager _workflowRunManager
```
      The workflow run manager object.
    - _player
```
RecordPlayer _player
```
    - _execId
```
java.lang.Integer _execId
```
    - _executor
```
java.util.concurrent.ExecutorService _executor
```
      Single thread to replay previous workflows in.
- Class org.kepler.profiling.gui.ViewWatchingTabPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
      The parent frame.
    - _tabName
```
java.lang.String _tabName
```
      The tab name.
    - _viewIsSelected
```
boolean _viewIsSelected
```
      If true, the view containing this tab is selected.
- Class org.kepler.profiling.gui.WorkflowRunOutlineTabPane extends ViewWatchingTabPane implements Serializable
  - Serialized Fields
    - _toggleCheckbox
```
javax.swing.JCheckBox _toggleCheckbox
```
      A check box for toggling something in the outline.
    - _runID
```
java.lang.Integer _runID
```
      The execution id.
Package org.kepler.provenance
- Class org.kepler.provenance.QueryException extends java.lang.Exception implements Serializable
- Class org.kepler.provenance.RecordingException extends java.lang.Exception implements Serializable
Package org.kepler.provenance.gui
- Class org.kepler.provenance.gui.DisabledGlassPane extends javax.swing.JComponent implements Serializable
  - Serialized Fields
    - message
```
javax.swing.JLabel message
```
- Class org.kepler.provenance.gui.ProvenanceConfigureAction extends FigureAction implements Serializable
  - Serialized Fields
    - _button
```
javax.swing.JButton _button
```
      The button for this action.
    - _enabled
```
boolean _enabled
```
      True if TOP provenance recorder is turned on.
    - _effigy
```
Effigy _effigy
```
      Effigy of top level.
    - _recorder
```
ProvenanceRecorder _recorder
```
      Top-level provenance recorder, if found.
    - _top
```
NamedObj _top
```
      Top-level NamedObj.
Package org.kepler.reporting.gui
- Class org.kepler.reporting.gui.DeleteItemButton extends javax.swing.JRadioButton implements Serializable
  - Serialized Fields
    - associatedItem
```
Item associatedItem
```
    - associatedPanel
```
DragAndDropPanel associatedPanel
```
    - buttonbackgroundcolor
```
java.awt.Color buttonbackgroundcolor
```
- Class org.kepler.reporting.gui.DragAndDropPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - ovalBorderselected
```
javax.swing.border.Border ovalBorderselected
```
    - ovalBorder
```
javax.swing.border.Border ovalBorder
```
    - associatedItem
```
Item associatedItem
```
    - propertiesButton
```
javax.swing.JRadioButton propertiesButton
```
    - associatedComponent
```
java.awt.Component associatedComponent
```
    - selected
```
boolean selected
```
    - _parentReportDesignerPanel
```
ReportDesignerPanel _parentReportDesignerPanel
```
- Class org.kepler.reporting.gui.DynamicReportItemPanel extends DragAndDropPanel implements Serializable
  - Serialized Fields
    - buttonbackgroundcolor
```
java.awt.Color buttonbackgroundcolor
```
    - _tableauFrame
```
TableauFrame _tableauFrame
```
    - _reportLayout
```
ReportLayout _reportLayout
```
    - _parentReportDesignerPanel
```
ReportDesignerPanel _parentReportDesignerPanel
```
- Class org.kepler.reporting.gui.ImagePanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - img
```
java.awt.Image img
```
- Class org.kepler.reporting.gui.ItemsOfInterestPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - showFormattingControls
```
boolean showFormattingControls
```
- Class org.kepler.reporting.gui.LabelPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - associatedItem
```
Item associatedItem
```
    - selected
```
boolean selected
```
- Class org.kepler.reporting.gui.PropertiesPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
    - item
```
Item item
```
    - table
```
PropertiesTable table
```
    - propertiesTableModel
```
javax.swing.table.TableModel propertiesTableModel
```
- Class org.kepler.reporting.gui.PropertiesTable extends javax.swing.JTable implements Serializable
  - Serialized Fields
    - rm
```
RowEditorModel rm
```
- Class org.kepler.reporting.gui.ReportDesignerPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - ref
```
ReportDesignerPanel ref
```
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - reportLayout
```
ReportLayout reportLayout
```
    - selectedItem
```
Item selectedItem
```
    - layoutpanel
```
javax.swing.JPanel layoutpanel
```
    - headerpanel
```
javax.swing.JPanel headerpanel
```
    - prevSelectedItem
```
Item prevSelectedItem
```
    - thecurrentitem
```
Item thecurrentitem
```
    - getimagebtn
```
javax.swing.JRadioButton getimagebtn
```
    - designersplitpane
```
javax.swing.JSplitPane designersplitpane
```
    - reportitemPanels
```
java.util.List<E> reportitemPanels
```
    - prevSelectedPanel
```
DragAndDropPanel prevSelectedPanel
```
    - currSelectedPanel
```
DragAndDropPanel currSelectedPanel
```
    - transparentblue
```
java.awt.Color transparentblue
```
    - layoutDiscardWarning
```
java.lang.String layoutDiscardWarning
```
    - dontShowDialogCheckBox
```
javax.swing.JCheckBox dontShowDialogCheckBox
```
- Class org.kepler.reporting.gui.ReportItemButton extends javax.swing.JRadioButton implements Serializable
  - Serialized Fields
    - associatedPanel
```
DragAndDropPanel associatedPanel
```
    - buttonbackgroundcolor
```
java.awt.Color buttonbackgroundcolor
```
- Class org.kepler.reporting.gui.ReportViewerPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - scrollPane
```
javax.swing.JScrollPane scrollPane
```
    - report
```
ReportInstance report
```
    - xslt
```
java.lang.String xslt
```
    - _refreshButton
```
javax.swing.JButton _refreshButton
```
    - _saveButton
```
javax.swing.JButton _saveButton
```
    - _keplerdatadir
```
java.lang.String _keplerdatadir
```
- Class org.kepler.reporting.gui.ReportViewerTOC extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _title
```
java.lang.String _title
```
    - _workflowId
```
java.lang.String _workflowId
```
    - items
```
javax.swing.ListModel<E> items
```
- Class org.kepler.reporting.gui.SectionTextReporting extends javax.swing.JTextField implements Serializable
  - Serialized Fields
    - associatedItem
```
Item associatedItem
```
    - associatedPanel
```
DragAndDropPanel associatedPanel
```
- Class org.kepler.reporting.gui.TextAreaReporting extends javax.swing.JTextArea implements Serializable
  - Serialized Fields
    - associatedItem
```
Item associatedItem
```
    - associatedPanel
```
DragAndDropPanel associatedPanel
```
Package org.kepler.reporting.rio
- Class org.kepler.reporting.rio.DynamicReportItem extends Item implements Serializable
  - Serialized Fields
    - userdefinedType
```
java.lang.String userdefinedType
```
    - sourceType
```
java.lang.String sourceType
```
- Class org.kepler.reporting.rio.Item extends java.lang.Object implements Serializable
  - Serialized Fields
    - name
```
java.lang.String name
```
    - type
```
java.lang.String type
```
    - icon
```
javax.swing.ImageIcon icon
```
    - labels
```
java.util.List<E> labels
```
    - values
```
java.util.List<E> values
```
    - itemProperties
```
ItemProperties itemProperties
```
    - selected
```
boolean selected
```
- Class org.kepler.reporting.rio.ItemLabel extends java.lang.Object implements Serializable
  - Serialized Fields
    - position
```
java.lang.String position
```
    - value
```
java.lang.String value
```
- Class org.kepler.reporting.rio.ItemProperties extends java.lang.Object implements Serializable
  - Serialized Fields
    - properties
```
java.util.SortedMap<K,V> properties
```
- Class org.kepler.reporting.rio.ItemValue extends java.lang.Object implements Serializable
  - Serialization Methods
    - readObject
```
private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException
```
      Deserialize the fields. Use the token value and type since Token is not serializable.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeObject
```
private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
```
      Serialize the fields. Set the token value and type since Token is not serializable.
      
      Throws:
      
      java.io.IOException
  - Serialized Fields
    - _tokenValue
```
java.lang.String _tokenValue
```
      The token value.
    - _tokenType
```
java.lang.String _tokenType
```
      The token type.
    - base64data
```
java.lang.String base64data
```
    - reference
```
boolean reference
```
- Class org.kepler.reporting.rio.ReportColumn extends java.lang.Object implements Serializable
  - Serialized Fields
    - items
```
java.util.List<E> items
```
- Class org.kepler.reporting.rio.ReportInstance extends ReportLayout implements Serializable
- Class org.kepler.reporting.rio.ReportSection extends java.lang.Object implements Serializable
  - Serialized Fields
    - columns
```
java.util.List<E> columns
```
- Class org.kepler.reporting.rio.StaticReportItem extends Item implements Serializable
- Class org.kepler.reporting.rio.StaticReportItemHR extends StaticReportItem implements Serializable
- Class org.kepler.reporting.rio.StaticReportItemImage extends StaticReportItem implements Serializable
- Class org.kepler.reporting.rio.StaticReportItemLabel extends StaticReportItem implements Serializable
  - Serialized Fields
    - view
```
java.lang.Object view
```
    - type
```
java.lang.String type
```
- Class org.kepler.reporting.rio.StaticReportItemSection extends StaticReportItem implements Serializable
  - Serialized Fields
    - view
```
java.lang.Object view
```
    - type
```
java.lang.String type
```
- Class org.kepler.reporting.rio.StaticReportItemText extends StaticReportItem implements Serializable
Package org.kepler.reporting.rio.gui
- Class org.kepler.reporting.rio.gui.ImageComponent extends java.awt.Component implements Serializable
  - Serialized Fields
    - img
```
java.awt.image.BufferedImage img
```
Package org.kepler.reporting.roml
- Class org.kepler.reporting.roml.ReportLayout extends java.lang.Object implements Serializable
  - Serialized Fields
    - lsid
```
KeplerLSID lsid
```
    - name
```
java.lang.String name
```
    - title
```
java.lang.String title
```
    - headerGraphic
```
java.lang.String headerGraphic
```
    - workflowLsid
```
KeplerLSID workflowLsid
```
    - sections
```
java.util.List<E> sections
```
    - modified
```
boolean modified
```
    - locked
```
boolean locked
```
    - dlm
```
javax.swing.DefaultListModel<E> dlm
```

Package org.kepler.sms.actors

Class org.kepler.sms.actors.MappingRefinementDialog extends javax.swing.JDialog implements Serializable

Serialized Fields

_mergeActor
```
MergeActor _mergeActor
```
Private members
_btnOK
```
javax.swing.JButton _btnOK
```
_btnCancel
```
javax.swing.JButton _btnCancel
```
_cbActors
```
javax.swing.JComboBox<E> _cbActors
```
_cbPorts
```
javax.swing.JComboBox<E> _cbPorts
```
_tblPortList
```
javax.swing.JTable _tblPortList
```

_model

org.kepler.sms.actors.MappingRefinementDialog._PortListTableModel _model

_mappings
```
java.util.Vector<E> _mappings
```
_parent
```
MergeEditorDialog _parent
```

Class org.kepler.sms.actors.MergeActor.MergeActorAction1 extends FigureAction implements Serializable
- Serialized Fields
  - _mergeActor
```
MergeActor _mergeActor
```
Class org.kepler.sms.actors.MergeActor.MergeActorAction2 extends FigureAction implements Serializable
- Serialized Fields
  - _mergeActor
```
MergeActor _mergeActor
```

Class org.kepler.sms.actors.MergeEditorDialog extends javax.swing.JDialog implements Serializable

Serialized Fields

_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events
_owner
```
java.awt.Frame _owner
```
_mergeActor
```
MergeActor _mergeActor
```
_commitBtn
```
javax.swing.JButton _commitBtn
```
_closeBtn
```
javax.swing.JButton _closeBtn
```

_outputTreeModel

javax.swing.tree.DefaultTreeModel _outputTreeModel

_inputTreeModel

javax.swing.tree.DefaultTreeModel _inputTreeModel

_outputPortTree
```
javax.swing.JTree _outputPortTree
```
_inputPortTree
```
javax.swing.JTree _inputPortTree
```
_semTypeTable
```
SemanticTypeTable _semTypeTable
```
_emptyAnnotationPort
```
IOPort _emptyAnnotationPort
```
_conversionTbl
```
javax.swing.JTable _conversionTbl
```

_emptyConversionModel

org.kepler.sms.actors.MergeEditorDialog._ConversionFunctionTableModel _emptyConversionModel

_mappings
```
java.util.Vector<E> _mappings
```
_targetPorts
```
java.util.Vector<E> _targetPorts
```

Package org.kepler.sms.gui

Class org.kepler.sms.gui.ActorSemanticTypeEditorPane extends javax.swing.JPanel implements Serializable
- Serialized Fields
  - _owner
```
java.awt.Frame _owner
```
  - _namedObj
```
NamedObj _namedObj
```
  - _classSelector
```
OntoClassSelectionJPanel _classSelector
```
  - _initialClasses
```
java.util.Vector<E> _initialClasses
```
Class org.kepler.sms.gui.AnnotateComponentAction extends FigureAction implements Serializable

Class org.kepler.sms.gui.CompositePortDialog extends javax.swing.JDialog implements Serializable

Serialized Fields

_result
```
KeplerCompositeIOPort _result
```
_direction
```
int _direction
```
Private members
_txtPortName
```
javax.swing.JTextField _txtPortName
```
_tblPortList
```
javax.swing.JTable _tblPortList
```
_btnCreate
```
javax.swing.JButton _btnCreate
```
_btnCancel
```
javax.swing.JButton _btnCancel
```
_entity
```
Entity<T extends Port> _entity
```

Class org.kepler.sms.gui.NamedOntClassTransferable extends java.lang.Object implements Serializable
- Serialized Fields
  - _flavors
```
java.awt.datatransfer.DataFlavor[] _flavors
```
  - _objectList
```
java.util.List<E> _objectList
```
Class org.kepler.sms.gui.OntoClassSearchDialog extends javax.swing.JDialog implements Serializable
- Serialized Fields
  - _namedClass
```
NamedOntClass _namedClass
```
  - _choiceList
```
javax.swing.JList<E> _choiceList
```

Class org.kepler.sms.gui.OntoClassSelectionJPanel extends javax.swing.JPanel implements Serializable

Serialized Fields

_ontoTree

org.kepler.sms.gui.OntoClassSelectionJPanel.OntoClassSelectionJTree _ontoTree

_classList

org.kepler.sms.gui.OntoClassSelectionJPanel.OntoClassSelectionJList _classList

_searchTxt
```
javax.swing.JTextField _searchTxt
```
_commentTxt
```
javax.swing.JTextArea _commentTxt
```
_searchBtn
```
javax.swing.JButton _searchBtn
```
_addBtn
```
javax.swing.JButton _addBtn
```
_removeBtn
```
javax.swing.JButton _removeBtn
```

Class org.kepler.sms.gui.OntoPropSearchDialog extends javax.swing.JDialog implements Serializable
- Serialized Fields
  - _namedProp
```
NamedOntProperty _namedProp
```
  - _choiceList
```
javax.swing.JList<E> _choiceList
```

Class org.kepler.sms.gui.PortSemanticTypeEditorPane extends javax.swing.JPanel implements Serializable

Serialized Fields

_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events
_portTree
```
javax.swing.JTree _portTree
```
_compositeBox
```
javax.swing.JCheckBox _compositeBox
```
_classSelector
```
OntoClassSelectionJPanel _classSelector
```
_generalizeBtn
```
javax.swing.JButton _generalizeBtn
```
_portRemoveBtn
```
javax.swing.JButton _portRemoveBtn
```
_manager
```
SemanticTypeManager _manager
```
_memento
```
SemanticTypeManagerMemento _memento
```

_treeModel

javax.swing.tree.DefaultTreeModel _treeModel

_selectedNode

org.kepler.sms.gui.PortSemanticTypeEditorPane._PortTreeNode _selectedNode

_semTypeTable
```
SemanticTypeTable _semTypeTable
```
_annotationObjects
```
java.util.Vector<E> _annotationObjects
```
_owner
```
java.awt.Frame _owner
```
_namedObj
```
NamedObj _namedObj
```
_direction
```
int _direction
```
KEPLER
```
java.lang.String KEPLER
```
IOPORT_ICON
```
java.lang.String IOPORT_ICON
```
VIRT_IOPORT_ICON
```
java.lang.String VIRT_IOPORT_ICON
```
COMP_IOPORT_ICON
```
java.lang.String COMP_IOPORT_ICON
```

Class org.kepler.sms.gui.SemanticLinkTable extends javax.swing.JPanel implements Serializable
- Serialized Fields
  - _buttonListener
```
java.awt.event.ActionListener _buttonListener
```
    anonymous class to handle button events
  - _linkDomainObjects
```
java.util.Vector<E> _linkDomainObjects
```
  - _table
```
javax.swing.JTable _table
```
  - _addBtn
```
javax.swing.JButton _addBtn
```
  - _removeBtn
```
javax.swing.JButton _removeBtn
```
  - _owner
```
java.awt.Frame _owner
```
  - _catalog
```
OntologyCatalog _catalog
```

Class org.kepler.sms.gui.SemanticSearchDialog extends javax.swing.JDialog implements Serializable

Serialized Fields

_checkBoxListener
```
java.awt.event.ItemListener _checkBoxListener
```
Anonymous class to handle check box state changes
_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events
_actorTable
```
SemanticTypeTable _actorTable
```
Private members
_inPortTable
```
SemanticTypeTable _inPortTable
```
_outPortTable
```
SemanticTypeTable _outPortTable
```
_searchActor
```
TypedAtomicActor _searchActor
```
_inSearchPort
```
TypedIOPort _inSearchPort
```
_outSearchPort
```
TypedIOPort _outSearchPort
```
_chkActorSearch
```
javax.swing.JCheckBox _chkActorSearch
```
_chkInPortSearch
```
javax.swing.JCheckBox _chkInPortSearch
```
_chkOutPortSearch
```
javax.swing.JCheckBox _chkOutPortSearch
```
_resultTree
```
PTree _resultTree
```
_btnSearch
```
javax.swing.JButton _btnSearch
```
_btnClose
```
javax.swing.JButton _btnClose
```
_lblQueryStatus
```
javax.swing.JLabel _lblQueryStatus
```
_owner
```
java.awt.Frame _owner
```
_namedObj
```
NamedObj _namedObj
```

Class org.kepler.sms.gui.SemanticTypeBrowserDialog extends javax.swing.JDialog implements Serializable
- Serialized Fields
  - _listeners
```
java.util.Vector<E> _listeners
```
  - _owner
```
java.awt.Frame _owner
```

Class org.kepler.sms.gui.SemanticTypeBrowserPane extends javax.swing.JPanel implements Serializable

Serialized Fields

KEPLER
```
java.lang.String KEPLER
```
ONTO_PATH
```
java.lang.String ONTO_PATH
```
_ontoselectCmb
```
javax.swing.JComboBox<E> _ontoselectCmb
```
_tabbedPane
```
javax.swing.JTabbedPane _tabbedPane
```
_classPane
```
javax.swing.JPanel _classPane
```
_propPane
```
javax.swing.JPanel _propPane
```
_classLst
```
javax.swing.JList<E> _classLst
```
_searchTxt
```
javax.swing.JTextField _searchTxt
```
_classSearchBtn
```
javax.swing.JButton _classSearchBtn
```
_superclassLst
```
javax.swing.JList<E> _superclassLst
```
_subclassLst
```
javax.swing.JList<E> _subclassLst
```
_classSiblingLst
```
javax.swing.JList<E> _classSiblingLst
```
_classPropLst
```
javax.swing.JList<E> _classPropLst
```
_classPropRangeLst
```
javax.swing.JList<E> _classPropRangeLst
```
_propLst
```
javax.swing.JList<E> _propLst
```
_propSearchTxt
```
javax.swing.JTextField _propSearchTxt
```
_propSearchBtn
```
javax.swing.JButton _propSearchBtn
```
_superpropLst
```
javax.swing.JList<E> _superpropLst
```
_subpropLst
```
javax.swing.JList<E> _subpropLst
```
_propSiblingLst
```
javax.swing.JList<E> _propSiblingLst
```

_propDomainClassLst

javax.swing.JList<E> _propDomainClassLst

_propRangeLst
```
javax.swing.JList<E> _propRangeLst
```
_commentTxt
```
javax.swing.JTextArea _commentTxt
```
_selectBtn
```
javax.swing.JButton _selectBtn
```
_closeBtn
```
javax.swing.JButton _closeBtn
```
_container
```
java.awt.Container _container
```

_currentModel

com.hp.hpl.jena.ontology.OntModel _currentModel

_selectListeners
```
java.util.Vector<E> _selectListeners
```
_catalog
```
OntologyCatalog _catalog
```

Class org.kepler.sms.gui.SemanticTypeBrowserSelectionEvent extends java.util.EventObject implements Serializable
- Serialized Fields
  - _source
```
java.lang.Object _source
```
  - _cls
```
NamedOntClass _cls
```

Class org.kepler.sms.gui.SemanticTypeEditor extends javax.swing.JDialog implements Serializable

Serialized Fields

_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events

_windowListener

java.awt.event.WindowListener _windowListener

_actorPane
```
ActorSemanticTypeEditorPane _actorPane
```

_inputPortPane

PortSemanticTypeEditorPane _inputPortPane

_outputPortPane

PortSemanticTypeEditorPane _outputPortPane

_commitBtn
```
javax.swing.JButton _commitBtn
```
_closeBtn
```
javax.swing.JButton _closeBtn
```
_helpBtn
```
javax.swing.JButton _helpBtn
```
_saveBox
```
javax.swing.JCheckBox _saveBox
```
_owner
```
java.awt.Frame _owner
```

Class org.kepler.sms.gui.SemanticTypeTable extends javax.swing.JPanel implements Serializable

Serialized Fields

_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events
_annotationObjects
```
java.util.Vector<E> _annotationObjects
```
_table
```
javax.swing.JTable _table
```
_browseBtn
```
javax.swing.JButton _browseBtn
```
_addBtn
```
javax.swing.JButton _addBtn
```
_removeBtn
```
javax.swing.JButton _removeBtn
```
_owner
```
java.awt.Frame _owner
```
_browser
```
SemanticTypeBrowserDialog _browser
```
_catalog
```
OntologyCatalog _catalog
```
_ontoNames
```
java.util.Vector<E> _ontoNames
```

Class org.kepler.sms.gui.SuggestCompatibleInputAction extends FigureAction implements Serializable
Class org.kepler.sms.gui.SuggestCompatibleOutputAction extends FigureAction implements Serializable
Class org.kepler.sms.gui.SuggestSimilarComponentsAction extends FigureAction implements Serializable

Class org.kepler.sms.gui.WorkflowTypeCheckerDialog extends javax.swing.JDialog implements Serializable

Serialized Fields

_buttonListener
```
java.awt.event.ActionListener _buttonListener
```
anonymous class to handle button events
_pane
```
javax.swing.JPanel _pane
```
_table
```
javax.swing.JTable _table
```
_unsafeTable
```
javax.swing.JTable _unsafeTable
```
_unknownTable
```
javax.swing.JTable _unknownTable
```
_adapterBtn
```
javax.swing.JButton _adapterBtn
```
_closeBtn
```
javax.swing.JButton _closeBtn
```
_structSafetyTxt
```
javax.swing.JTextField _structSafetyTxt
```
_semSafetyTxt
```
javax.swing.JTextField _semSafetyTxt
```

_structOutTypeTxt

javax.swing.JTextField _structOutTypeTxt

_structInTypeTxt
```
javax.swing.JTextField _structInTypeTxt
```
_semOutTypeTbl
```
javax.swing.JTable _semOutTypeTbl
```
_semInTypeTbl
```
javax.swing.JTable _semInTypeTbl
```
_owner
```
java.awt.Frame _owner
```
_entity
```
Entity<T extends Port> _entity
```
_catalog
```
OntologyCatalog _catalog
```
_browser
```
SemanticTypeBrowserDialog _browser
```

_selectionModel

diva.canvas.interactor.SelectionModel _selectionModel

_selectionInteractor

diva.canvas.interactor.SelectionInteractor _selectionInteractor

_graphModel
```
diva.graph.GraphModel _graphModel
```
_controller
```
diva.graph.GraphController _controller
```

_defaultSelectionRenderer

diva.canvas.interactor.SelectionRenderer _defaultSelectionRenderer

_edgeSelectionRenderer

diva.canvas.interactor.SelectionRenderer _edgeSelectionRenderer

Package org.kepler.spark.examples
- Class org.kepler.spark.examples.JavaWordCount.CoGroupCountWords extends java.lang.Object implements Serializable
- Class org.kepler.spark.examples.JavaWordCount.ComparePairs extends java.lang.Object implements Serializable
- Class org.kepler.spark.examples.JavaWordCount.CountWords extends java.lang.Object implements Serializable
- Class org.kepler.spark.examples.JavaWordCount.CountWordsMap extends java.lang.Object implements Serializable
- Class org.kepler.spark.examples.JavaWordCount.JoinFunction extends java.lang.Object implements Serializable
- Class org.kepler.spark.examples.JavaWordCount.TokenizeLine extends java.lang.Object implements Serializable
Package org.kepler.spark.stub
- Class org.kepler.spark.stub.KeplerCoGroupStub extends KeplerPairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,scala.Tuple2<java.lang.Iterable<java.lang.Object>,java.lang.Iterable<java.lang.Object>>>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.KeplerCrossStub extends KeplerPairFlatMapFunction<java.util.Iterator<scala.Tuple2<scala.Tuple2<java.lang.Object,java.lang.Object>,scala.Tuple2<java.lang.Object,java.lang.Object>>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.KeplerMapStub extends KeplerPairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,java.lang.Object>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.KeplerMatchStub extends KeplerPairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,scala.Tuple2<java.lang.Object,java.lang.Object>>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.KeplerPairFlatMapFunction extends PairFlatMapFunctionBase<T,K,V> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.KeplerReduceStub extends KeplerPairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,java.lang.Iterable<java.lang.Object>>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.PairFlatMapFunctionBase extends java.lang.Object implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.ScriptEngineMapStub extends ScriptEnginePairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,java.lang.Object>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.ScriptEnginePairFlatMapFunction extends PairFlatMapFunctionBase<T,K,V> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
- Class org.kepler.spark.stub.ScriptEngineReduceStub extends ScriptEnginePairFlatMapFunction<java.util.Iterator<scala.Tuple2<java.lang.Object,java.util.List<java.lang.Object>>>,java.lang.Object,java.lang.Object> implements Serializable
  - Serialization Methods
    - readExternal
```
public void readExternal(java.io.ObjectInput in)
                  throws java.io.IOException,
                         java.lang.ClassNotFoundException
```
      Deserialize the configuration.
      
      Throws:
      
      java.io.IOException
      
      java.lang.ClassNotFoundException
    - writeExternal
```
public void writeExternal(java.io.ObjectOutput out)
                   throws java.io.IOException
```
      Serialize the configuration.
      
      Throws:
      
      java.io.IOException
Package org.kepler.spark.type
- Class org.kepler.spark.type.RecordValue extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - _recordMap
```
java.util.Map<K,V> _recordMap
```
      The serialized record token.
Package org.kepler.ssh
- Class org.kepler.ssh.ExecException extends java.lang.Exception implements Serializable
- Class org.kepler.ssh.ExecTimeoutException extends ExecException implements Serializable
- Class org.kepler.ssh.SshException extends ExecException implements Serializable
Package org.kepler.stratosphere.io.input
- Class org.kepler.stratosphere.io.input.DataFileInputFormat extends eu.stratosphere.api.java.record.io.FileInputFormat implements Serializable
  - Serialized Fields
    - end
```
boolean end
```
    - splitPath
```
eu.stratosphere.core.fs.Path splitPath
```
- Class org.kepler.stratosphere.io.input.TokenInputFormat extends eu.stratosphere.api.java.record.io.GenericInputFormat implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - _tokenFromSource
```
ArrayToken _tokenFromSource
```
      The token read by the DDP source actor.
    - _tokenFromSplit
```
Token _tokenFromSplit
```
      The token read from a split.
Package org.kepler.stratosphere.io.output
- Class org.kepler.stratosphere.io.output.NullOutputFormat extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
- Class org.kepler.stratosphere.io.output.StringOutputFormat extends eu.stratosphere.api.java.record.io.FileOutputFormat implements Serializable
  - Serialized Fields
    - buffer
```
java.lang.StringBuilder buffer
```
- Class org.kepler.stratosphere.io.output.TokenOutputFormat extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - numFields
```
int numFields
```
    - classes
```
java.lang.Class<T>[] classes
```
    - recordPositions
```
int[] recordPositions
```
    - tokenList
```
java.util.List<E> tokenList
```
      A list of tokens accumulated from writeRecord().
    - sinkActorName
```
java.lang.String sinkActorName
```
      The full name of the DDPDataSink actor to write the list of tokens.
- Class org.kepler.stratosphere.io.output.ValueOnlyOutputFormat extends eu.stratosphere.api.java.record.io.FileOutputFormat implements Serializable
  - Serialized Fields
    - buffer
```
java.lang.StringBuilder buffer
```
Package org.kepler.stratosphere.type
- Class org.kepler.stratosphere.type.ByteArray extends java.lang.Object implements Serializable
  - Serialized Fields
    - _bytes
```
byte[] _bytes
```
      The byte array.
    - hashCode
```
int hashCode
```
      hash code for the byte array object.
- Class org.kepler.stratosphere.type.RecordValue extends eu.stratosphere.types.StringValue implements Serializable
  
  serialVersionUID:
  
  1L
Package org.kepler.tagging
- Class org.kepler.tagging.TagManagerAction extends FigureAction implements Serializable
Package org.kepler.tagging.gui
- Class org.kepler.tagging.gui.AutoCompleteComboBox extends javax.swing.JComboBox implements Serializable
  - Serialized Fields
    - normalFont
```
java.awt.Font normalFont
```
    - tagBarDisplayUI
```
TagBarDisplayUI tagBarDisplayUI
```
    - catalog
```
OntologyCatalog catalog
```
    - autoCompletions
```
java.util.Set<E> autoCompletions
```
    - canvas
```
CompositeActor canvas
```
    - existingTagsPanel
```
ExistingTagsPanel existingTagsPanel
```
    - tag
```
NamedOntClass tag
```
    - valid
```
boolean valid
```
    - instructionsDisplayed
```
boolean instructionsDisplayed
```
- Class org.kepler.tagging.gui.DeletableColorIconLabel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - object
```
java.lang.Object object
```
    - color
```
java.awt.Color color
```
    - deleteLabel
```
javax.swing.JLabel deleteLabel
```
    - textLabel
```
javax.swing.JLabel textLabel
```
    - listeners
```
java.util.Vector<E> listeners
```
    - orphaned
```
boolean orphaned
```
- Class org.kepler.tagging.gui.DeletableColorIconLabelEvent extends java.util.EventObject implements Serializable
  - Serialized Fields
    - label
```
DeletableColorIconLabel label
```
- Class org.kepler.tagging.gui.ExistingTagsPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - ptolemyFrame
```
PtolemyFrame ptolemyFrame
```
    - classes
```
java.util.Set<E> classes
```
    - objects
```
java.util.Collection<E> objects
```
    - tagBarUI
```
TagBarUI tagBarUI
```
- Class org.kepler.tagging.gui.NonComboBoxTest extends javax.swing.JComponent implements Serializable
  - Serialized Fields
    - currentTags
```
java.util.Vector<E> currentTags
```
    - autoCompletions
```
java.util.Vector<E> autoCompletions
```
    - availableTags
```
java.util.Vector<E> availableTags
```
    - catalog
```
OntologyCatalog catalog
```
    - textField
```
javax.swing.JComboBox<E> textField
```
    - list
```
javax.swing.JList<E> list
```
    - lastSeen
```
java.lang.String lastSeen
```
    - useAutoCompletion
```
boolean useAutoCompletion
```
- Class org.kepler.tagging.gui.OntologyDisplaySelectionEvent extends java.util.EventObject implements Serializable
  - Serialized Fields
    - ontModel
```
NamedOntModel ontModel
```
- Class org.kepler.tagging.gui.OntologyDisplayUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - table
```
javax.swing.JTable table
```
    - listeners
```
java.util.Set<E> listeners
```
    - previousRowSelection
```
int previousRowSelection
```
- Class org.kepler.tagging.gui.OntologyEditorUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - addBtn
```
javax.swing.JButton addBtn
```
    - removeBtn
```
javax.swing.JButton removeBtn
```
    - superclassesBtn
```
javax.swing.JButton superclassesBtn
```
    - tree
```
javax.swing.JTree tree
```
    - root
```
javax.swing.tree.DefaultMutableTreeNode root
```
    - currentModel
```
NamedOntModel currentModel
```
    - classSelectedReset
```
boolean classSelectedReset
```
- Class org.kepler.tagging.gui.TagAddAction extends FigureAction implements Serializable
  - Serialized Fields
    - _button
```
javax.swing.JButton _button
```
      The button for this action.
    - _enabled
```
boolean _enabled
```
      True if TOP provenance recorder is turned on.
    - _effigy
```
Effigy _effigy
```
      Effigy of top level.
    - _foundPrevious
```
boolean _foundPrevious
```
      True if found existing provenance recorder in model.
    - _top
```
NamedObj _top
```
      Top-level NamedObj.
    - _tagBarInsertionUI
```
TagBarInsertionUI _tagBarInsertionUI
```
- Class org.kepler.tagging.gui.TagBarDisplayUI extends javax.swing.JComponent implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - tagBarUI
```
TagBarUI tagBarUI
```
    - existingTagsPanel
```
ExistingTagsPanel existingTagsPanel
```
- Class org.kepler.tagging.gui.TagBarInsertionUI extends javax.swing.JComponent implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - existingTagsPanel
```
ExistingTagsPanel existingTagsPanel
```
    - combo
```
AutoCompleteComboBox combo
```
    - tagBarUI
```
TagBarUI tagBarUI
```
    - valid
```
boolean valid
```
    - canvas
```
CompositeActor canvas
```
    - ptolemyFrame
```
PtolemyFrame ptolemyFrame
```
    - typeLabel
```
javax.swing.JLabel typeLabel
```
    - largeLabelDimension
```
java.awt.Dimension largeLabelDimension
```
- Class org.kepler.tagging.gui.TaggingPanel extends javax.swing.JPanel implements Serializable
- Class org.kepler.tagging.gui.TagManagerUI extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - parent
```
javax.swing.JFrame parent
```
    - okButton
```
javax.swing.JButton okButton
```
- Class org.kepler.tagging.gui.TagManagerUITester extends javax.swing.JPanel implements Serializable
Package org.kepler.workflowrunmanager
- Class org.kepler.workflowrunmanager.WorkflowRunManagerEvent extends java.util.EventObject implements Serializable
  - Serialized Fields
    - _event
```
java.lang.String _event
```
    - _LSIDs
```
java.util.List<E> _LSIDs
```
    - _isLastEvent
```
boolean _isLastEvent
```
    - _eventData
```
java.lang.Object _eventData
```
Package org.kepler.workflowrunmanager.gui
- Class org.kepler.workflowrunmanager.gui.ColumnGroup extends javax.swing.table.TableColumn implements Serializable
  - Serialized Fields
    - renderer
```
javax.swing.table.TableCellRenderer renderer
```
      Cell renderer for group header.
    - v
```
java.util.Vector<E> v
```
      Holds the TableColumn or ColumnGroup objects contained within this ColumnGroup instance.
    - cgHeaderObject
```
java.lang.Object cgHeaderObject
```
      The ColumnGroup header object of the column.
    - margin
```
int margin
```
      The margin to use for rendering.
    - headerEditor
```
javax.swing.table.TableCellEditor headerEditor
```
    - isHeaderEditable
```
boolean isHeaderEditable
```
    - isVisible
```
boolean isVisible
```
- Class org.kepler.workflowrunmanager.gui.DateCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - tf
```
javax.swing.JTextField tf
```
    - dateVerifier
```
org.kepler.workflowrunmanager.gui.DateCellEditor.DateVerifier dateVerifier
```
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
    - dispatcher
```
org.kepler.workflowrunmanager.gui.DateCellEditor.KeyEventDispatcherClass dispatcher
```
- Class org.kepler.workflowrunmanager.gui.DurationCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - tf
```
javax.swing.JTextField tf
```
    - durationVerifier
```
org.kepler.workflowrunmanager.gui.DurationCellEditor.DurationVerifier durationVerifier
```
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
    - dispatcher
```
org.kepler.workflowrunmanager.gui.DurationCellEditor.KeyEventDispatcherClass dispatcher
```
- Class org.kepler.workflowrunmanager.gui.DurationCellRenderer extends javax.swing.JLabel implements Serializable
  - Serialized Fields
    - ts
```
util.TableSorter ts
```
    - wrmtm
```
WorkflowRunManagerTableModel wrmtm
```
    - modelRowIndex
```
int modelRowIndex
```
    - lseconds
```
java.lang.Long lseconds
```
    - seconds
```
java.lang.Integer seconds
```
    - hours
```
java.lang.Integer hours
```
    - minutes
```
java.lang.Integer minutes
```
    - hoursString
```
java.lang.String hoursString
```
    - minutesString
```
java.lang.String minutesString
```
    - secondsString
```
java.lang.String secondsString
```
- Class org.kepler.workflowrunmanager.gui.ExecIdCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - tf
```
javax.swing.JTextField tf
```
    - execIdVerifier
```
org.kepler.workflowrunmanager.gui.ExecIdCellEditor.ExecIdVerifier execIdVerifier
```
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
    - dispatcher
```
org.kepler.workflowrunmanager.gui.ExecIdCellEditor.KeyEventDispatcherClass dispatcher
```
- Class org.kepler.workflowrunmanager.gui.FormatRenderer extends javax.swing.table.DefaultTableCellRenderer implements Serializable
  - Serialized Fields
    - formatter
```
java.text.Format formatter
```
    - ts
```
util.TableSorter ts
```
    - wrmtm
```
WorkflowRunManagerTableModel wrmtm
```
    - modelRowIndex
```
int modelRowIndex
```
- Class org.kepler.workflowrunmanager.gui.GroupableTableCellRenderer extends javax.swing.table.DefaultTableCellRenderer implements Serializable
  - Serialized Fields
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
- Class org.kepler.workflowrunmanager.gui.GroupableTableColumnModel extends javax.swing.table.DefaultTableColumnModel implements Serializable
  - Serialized Fields
    - allColumnGroups
```
java.util.ArrayList<E> allColumnGroups
```
    - columnGroups
```
java.util.ArrayList<E> columnGroups
```
      Hold the list of ColumnGroups which define what group each normal column is within, if any.
- Class org.kepler.workflowrunmanager.gui.GroupableTableHeader extends javax.swing.table.JTableHeader implements Serializable
  - Serialized Fields
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
- Class org.kepler.workflowrunmanager.gui.WorkflowRunManagerPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _frame
```
TableauFrame _frame
```
    - _tabName
```
java.lang.String _tabName
```
    - wrmDefaults
```
WRMDefaults wrmDefaults
```
    - wrmTableModel
```
WorkflowRunManagerTableModel wrmTableModel
```
    - wrmjTable
```
javax.swing.JTable wrmjTable
```
    - sorter
```
util.TableSorter sorter
```
    - popupMenu
```
javax.swing.JPopupMenu popupMenu
```
    - unsupportedRecordingTypeMsg
```
javax.swing.JLabel unsupportedRecordingTypeMsg
```
    - refreshButton
```
javax.swing.JButton refreshButton
```
    - authenticate
```
boolean authenticate
```
    - openMenuItem
```
javax.swing.JMenuItem openMenuItem
```
    - exportMenuItem
```
javax.swing.JMenuItem exportMenuItem
```
    - uploadMenuItem
```
javax.swing.JMenuItem uploadMenuItem
```
    - deleteMenuItem
```
javax.swing.JMenuItem deleteMenuItem
```
    - viewRunLsidMenuItem
```
javax.swing.JMenuItem viewRunLsidMenuItem
```
    - viewWorkflowLSIDMenuItem
```
javax.swing.JMenuItem viewWorkflowLSIDMenuItem
```
    - provWarningMenuItem
```
javax.swing.JMenuItem provWarningMenuItem
```
    - changeColVisibleMenuItem
```
javax.swing.JMenuItem changeColVisibleMenuItem
```
    - runsIncompatModDepsWarningMenuItem
```
javax.swing.JMenuItem runsIncompatModDepsWarningMenuItem
```
    - downloadMenuItem
```
javax.swing.JMenuItem downloadMenuItem
```
    - showGraphicalActorsOutputsMenuItem
```
javax.swing.JMenuItem showGraphicalActorsOutputsMenuItem
```
    - model
```
NamedObj model
```
    - _lastSelectedRows
```
int[] _lastSelectedRows
```
    - _isProvenanceEnabled
```
boolean _isProvenanceEnabled
```
    - workflowRunManager
```
WorkflowRunManager workflowRunManager
```
    - kgf
```
KeplerGraphFrame kgf
```
    - lastMouseEventWasPopupTrigger
```
boolean lastMouseEventWasPopupTrigger
```
    - execIdHeaderCellEditor
```
ExecIdCellEditor execIdHeaderCellEditor
```
    - startTimeHeaderCellEditor
```
DateCellEditor startTimeHeaderCellEditor
```
    - durationHeaderCellEditor
```
DurationCellEditor durationHeaderCellEditor
```
    - cellEditorListener
```
javax.swing.event.CellEditorListener cellEditorListener
```
    - _listSelectionListener
```
javax.swing.event.ListSelectionListener _listSelectionListener
```
      anonymous class to handle list selection events
- Class org.kepler.workflowrunmanager.gui.WorkflowRunManagerTableModel extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
    - workflowRuns
```
java.util.ArrayList<E> workflowRuns
```
    - tableauFrame
```
TableauFrame tableauFrame
```
- Class org.kepler.workflowrunmanager.gui.WRMDefaultTableCellRenderer extends javax.swing.JLabel implements Serializable
  - Serialized Fields
    - ts
```
util.TableSorter ts
```
    - wrmtm
```
WorkflowRunManagerTableModel wrmtm
```
    - modelRowIndex
```
int modelRowIndex
```
    - wrmdefaults
```
WRMDefaults wrmdefaults
```
Package org.kepler.workflowrunmanager.gui.kar
- Class org.kepler.workflowrunmanager.gui.kar.ExportRunsArchiveAction extends ExportArchiveAction implements Serializable
  - Serialized Fields
    - _runLSIDs
```
java.util.List<E> _runLSIDs
```
    - workflowRunManager
```
WorkflowRunManager workflowRunManager
```
Package org.kepler.workflowscheduler.gui
- Class org.kepler.workflowscheduler.gui.DisableScheduleAction extends SchedulerAbstractAction implements Serializable
- Class org.kepler.workflowscheduler.gui.EnableScheduleAction extends SchedulerAbstractAction implements Serializable
- Class org.kepler.workflowscheduler.gui.ExistingSchedulePanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - scheduleList
```
Schedule[] scheduleList
```
    - scheduleTableModel
```
ScheduleTableModel scheduleTableModel
```
    - scheduleTable
```
javax.swing.JTable scheduleTable
```
    - parent
```
TableauFrame parent
```
    - scheduleChangeController
```
ScheduleChangeController scheduleChangeController
```
    - schedulerParentPanel
```
WorkflowSchedulerParentPanel schedulerParentPanel
```
- Class org.kepler.workflowscheduler.gui.NonResponseTreePath extends javax.swing.tree.TreePath implements Serializable
- Class org.kepler.workflowscheduler.gui.OpenWorkflowSchedulerDialogAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.workflowscheduler.gui.RemoveScheduleAction extends SchedulerAbstractAction implements Serializable
- Class org.kepler.workflowscheduler.gui.RepositoryAndRunEngineComboBoxRenderer extends javax.swing.JLabel implements Serializable
  - Serialized Fields
    - type
```
java.lang.String type
```
- Class org.kepler.workflowscheduler.gui.ScheduleChangeController.NonSelectableTreeSelectionModel extends javax.swing.tree.DefaultTreeSelectionModel implements Serializable
- Class org.kepler.workflowscheduler.gui.SchedulerAbstractAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - schedulerURL
```
java.lang.String schedulerURL
```
    - schedule
```
Schedule schedule
```
    - parent
```
TableauFrame parent
```
    - scheduleChangeController
```
ScheduleChangeController scheduleChangeController
```
    - schedulerParentPanel
```
WorkflowSchedulerParentPanel schedulerParentPanel
```
- Class org.kepler.workflowscheduler.gui.ScheduleTableModel extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - scheduleList
```
Schedule[] scheduleList
```
- Class org.kepler.workflowscheduler.gui.ScheduleWorkflowAction extends SchedulerAbstractAction implements Serializable
- Class org.kepler.workflowscheduler.gui.WorkflowSchedulerComponentLibraryTab extends ComponentLibraryTab implements Serializable
  - Serialized Fields
    - newLibrary
```
EntityLibrary newLibrary
```
    - nameFilter
```
java.util.Vector<E> nameFilter
```
- Class org.kepler.workflowscheduler.gui.WorkflowSchedulerDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - closeButton
```
javax.swing.JButton closeButton
```
    - topPanel
```
javax.swing.JPanel topPanel
```
    - progressBar
```
javax.swing.JProgressBar progressBar
```
    - scheduleChangeController
```
ScheduleChangeController scheduleChangeController
```
    - componentsTab
```
WorkflowSchedulerComponentLibraryTab componentsTab
```
    - componentAndSchedulerPane
```
DualVerticalViewPane componentAndSchedulerPane
```
- Class org.kepler.workflowscheduler.gui.WorkflowSchedulerPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - schedulerPanel
```
javax.swing.JPanel schedulerPanel
```
    - parameterPanel
```
javax.swing.JPanel parameterPanel
```
    - buttonPanel
```
javax.swing.JPanel buttonPanel
```
    - existingSchedulePanel
```
ExistingSchedulePanel existingSchedulePanel
```
    - textFieldConstraint
```
java.awt.GridBagConstraints textFieldConstraint
```
    - labelConstraint
```
java.awt.GridBagConstraints labelConstraint
```
    - lastConstraint
```
java.awt.GridBagConstraints lastConstraint
```
    - nameTextLabel
```
javax.swing.JLabel nameTextLabel
```
    - karSourceLocationLabel
```
javax.swing.JLabel karSourceLocationLabel
```
    - intervalTextField
```
javax.swing.JTextField intervalTextField
```
    - startTimeTextField
```
javax.swing.JTextField startTimeTextField
```
    - endTimeTextField
```
javax.swing.JTextField endTimeTextField
```
    - startTime
```
java.lang.String startTime
```
    - endTime
```
java.lang.String endTime
```
    - interval
```
java.lang.String interval
```
    - intervalUnitComboBox
```
javax.swing.JComboBox<E> intervalUnitComboBox
```
    - startTimeZoneComboBox
```
javax.swing.JComboBox<E> startTimeZoneComboBox
```
    - endTimeZoneComboBox
```
javax.swing.JComboBox<E> endTimeZoneComboBox
```
    - workflowId
```
java.lang.String workflowId
```
    - workflowName
```
java.lang.String workflowName
```
    - karLSID
```
java.lang.String karLSID
```
    - karSourceRepositoryName
```
java.lang.String karSourceRepositoryName
```
    - runKarDestinationRepositoryName
```
java.lang.String runKarDestinationRepositoryName
```
    - workflowRunEngineURL
```
java.lang.String workflowRunEngineURL
```
    - existingScheduleList
```
Schedule[] existingScheduleList
```
    - scheduleAction
```
ScheduleWorkflowAction scheduleAction
```
    - scheduleChangeController
```
ScheduleChangeController scheduleChangeController
```
    - workflowRunEngineBox
```
javax.swing.JComboBox<E> workflowRunEngineBox
```
    - resultDestinationBox
```
javax.swing.JComboBox<E> resultDestinationBox
```
    - workflowRunEngineList
```
java.util.Vector<E> workflowRunEngineList
```
    - repositoryList
```
java.util.Vector<E> repositoryList
```
    - searchWorker
```
SearchScheduleSwingWorker searchWorker
```
    - availableTimeZoneIDsInServer
```
java.util.Vector<E> availableTimeZoneIDsInServer
```
    - availableTimeZoneNames
```
java.util.Vector<E> availableTimeZoneNames
```
    - schedulerParentPanel
```
WorkflowSchedulerParentPanel schedulerParentPanel
```
    - existingScheduleTablelock
```
java.util.concurrent.locks.Lock existingScheduleTablelock
```
    - intervalUnitSelectionaction
```
IntervalUnitComboBoxAction intervalUnitSelectionaction
```
    - timeZoneDisplayHash
```
java.util.HashMap<K,V> timeZoneDisplayHash
```
    - startTimeZoneID
```
java.lang.String startTimeZoneID
```
    - startTimeZoneName
```
java.lang.String startTimeZoneName
```
    - startTimeLabel
```
java.lang.String startTimeLabel
```
    - endTimeZoneID
```
java.lang.String endTimeZoneID
```
    - endTimeZoneName
```
java.lang.String endTimeZoneName
```
    - endTimeLabel
```
java.lang.String endTimeLabel
```
    - timeZoneIDsCacheFile
```
java.io.File timeZoneIDsCacheFile
```
    - schedulerURL
```
java.lang.String schedulerURL
```
- Class org.kepler.workflowscheduler.gui.WorkflowSchedulerParentPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - message
```
javax.swing.JLabel message
```
    - parent
```
TableauFrame parent
```
    - schedulerPanel
```
WorkflowSchedulerPanel schedulerPanel
```
    - scheduleChangeController
```
ScheduleChangeController scheduleChangeController
```
    - trackSelectRemoteWorkflow
```
java.util.Stack<E> trackSelectRemoteWorkflow
```
    - previousSelectionIsWorkflow
```
java.util.concurrent.atomic.AtomicBoolean previousSelectionIsWorkflow
```
- Class org.kepler.workflowscheduler.gui.WorkflowSchedulerServerInstallationInfoPanel extends javax.swing.JTextPane implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - dialog
```
WorkflowSchedulerDialog dialog
```
Package org.kepler.workflowscheduler.gui.configurationwizard
- Class org.kepler.workflowscheduler.gui.configurationwizard.KnownWorkflowRunEnginePanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - BORDERGAP
```
int BORDERGAP
```
    - engineList
```
WorkflowRunEngine[] engineList
```
    - engineTableModel
```
KnownWorkflowRunEngineTableModel engineTableModel
```
    - engineTable
```
javax.swing.JTable engineTable
```
    - selectedEngine
```
WorkflowRunEngine selectedEngine
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.KnownWorkflowRunEngineTableModel extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - engineList
```
WorkflowRunEngine[] engineList
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.OpenWorkflowRunEngineConfigDialogAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.OpenWorkflowSchedulerURLConfigDialogAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.WorkflowRunEngineConfigurationDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - textFieldConstraint
```
java.awt.GridBagConstraints textFieldConstraint
```
    - labelConstraint
```
java.awt.GridBagConstraints labelConstraint
```
    - lastConstraint
```
java.awt.GridBagConstraints lastConstraint
```
    - nameTextField
```
javax.swing.JTextField nameTextField
```
    - urlTextField
```
javax.swing.JTextField urlTextField
```
    - mainPanel
```
javax.swing.JPanel mainPanel
```
    - addingEnginePanel
```
javax.swing.JPanel addingEnginePanel
```
    - knownRunEnginePanel
```
KnownWorkflowRunEnginePanel knownRunEnginePanel
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.WorkflowRunEnginePreferenceTab extends javax.swing.JTextPane implements Serializable
  - Serialized Fields
    - tabName
```
java.lang.String tabName
```
    - parent
```
TableauFrame parent
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.WorkflowSchedulerPreferenceTab extends javax.swing.JTextPane implements Serializable
  - Serialized Fields
    - tabName
```
java.lang.String tabName
```
    - parent
```
TableauFrame parent
```
- Class org.kepler.workflowscheduler.gui.configurationwizard.WorkflowSchedulerURLConfigurationDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - parent
```
TableauFrame parent
```
    - textFieldConstraint
```
java.awt.GridBagConstraints textFieldConstraint
```
    - labelConstraint
```
java.awt.GridBagConstraints labelConstraint
```
    - lastConstraint
```
java.awt.GridBagConstraints lastConstraint
```
    - urlTextField
```
javax.swing.JTextField urlTextField
```

Package org.mlc.swing.example

Class org.mlc.swing.example.CustomerPanel extends javax.swing.JPanel implements Serializable

Serialized Fields

suffixCombo
```
javax.swing.JComboBox<E> suffixCombo
```
lastNameLabel
```
javax.swing.JLabel lastNameLabel
```
firstNameText
```
javax.swing.JTextField firstNameText
```
lastNameText
```
javax.swing.JTextField lastNameText
```
faxText
```
javax.swing.JTextField faxText
```
contactSeparator
```
java.awt.Component contactSeparator
```
surnameLabel
```
javax.swing.JLabel surnameLabel
```
okButton
```
javax.swing.JButton okButton
```
cancelButton
```
javax.swing.JButton cancelButton
```
buttonBar
```
java.awt.Component buttonBar
```
workPhoneLabel
```
javax.swing.JLabel workPhoneLabel
```
workPhoneText
```
javax.swing.JTextField workPhoneText
```
emailText
```
javax.swing.JTextField emailText
```
homePhoneText
```
javax.swing.JTextField homePhoneText
```
faxLabel
```
javax.swing.JLabel faxLabel
```
ordersSeparator
```
java.awt.Component ordersSeparator
```
surnameCombo
```
javax.swing.JComboBox<E> surnameCombo
```
nameSeparator
```
java.awt.Component nameSeparator
```
suffixLabel
```
javax.swing.JLabel suffixLabel
```
emailLabel
```
javax.swing.JLabel emailLabel
```
homePhoneLabel
```
javax.swing.JLabel homePhoneLabel
```
firstNameLabel
```
javax.swing.JLabel firstNameLabel
```
orderTableControl
```
javax.swing.JTable orderTableControl
```
orderTable
```
javax.swing.JScrollPane orderTable
```

Class org.mlc.swing.example.ExamplePanel extends javax.swing.JPanel implements Serializable

Serialized Fields

nameLabel
```
javax.swing.JLabel nameLabel
```
nameText
```
javax.swing.JTextField nameText
```
tabbedPane
```
javax.swing.JTabbedPane tabbedPane
```
firstTab
```
javax.swing.JPanel firstTab
```
secondTab
```
javax.swing.JPanel secondTab
```
thirdTab
```
javax.swing.JPanel thirdTab
```

Package org.mlc.swing.layout

Class org.mlc.swing.layout.DndList extends javax.swing.JList implements Serializable

serialVersionUID:

1L
- Serialized Fields
  - editor
```
FormEditor editor
```
  - fDragSource
```
java.awt.dnd.DragSource fDragSource
```
Class org.mlc.swing.layout.FormDebugPanel extends javax.swing.JPanel implements Serializable
- Serialized Fields
  - paintInBackground
```
boolean paintInBackground
```
    Specifies whether the grid shall be painted in the background. Is off by default and so the grid is painted in the foreground.
  - paintDiagonals
```
boolean paintDiagonals
```
    Specifies whether the container's diagonals should be painted.
  - gridColor
```
java.awt.Color gridColor
```
    Holds the color used to paint the debug grid.
  - deactivated
```
boolean deactivated
```

Class org.mlc.swing.layout.FormEditor extends javax.swing.JPanel implements Serializable

Serialized Fields

verticalAlignmentList

java.lang.String[] verticalAlignmentList

horizontalAlignmentList

java.lang.String[] horizontalAlignmentList

colSpinnerModel

org.mlc.swing.layout.FormEditor.ColSpanSpinnerModel colSpinnerModel

rowSpinnerModel

org.mlc.swing.layout.FormEditor.RowSpanSpinnerModel rowSpinnerModel

newComponentAction
```
javax.swing.Action newComponentAction
```

removeComponentAction

javax.swing.Action removeComponentAction

insertRowBeforeAction

javax.swing.Action insertRowBeforeAction

insertRowAfterAction
```
javax.swing.Action insertRowAfterAction
```
deleteRowAction
```
javax.swing.Action deleteRowAction
```

insertColumnBeforeAction

javax.swing.Action insertColumnBeforeAction

insertColumnAfterAction

javax.swing.Action insertColumnAfterAction

deleteColumnAction
```
javax.swing.Action deleteColumnAction
```

verticalAlignmentCombo

javax.swing.JComboBox<E> verticalAlignmentCombo

horizontalAlignmentCombo

javax.swing.JComboBox<E> horizontalAlignmentCombo

rowSpanSpinner
```
javax.swing.JSpinner rowSpanSpinner
```
columnSpanSpinner
```
javax.swing.JSpinner columnSpanSpinner
```
columnSpanLabel
```
javax.swing.JLabel columnSpanLabel
```

horizontalAlignmentLabel

javax.swing.JLabel horizontalAlignmentLabel

rowSpanLabel
```
javax.swing.JLabel rowSpanLabel
```

verticalAlignmentLabel

javax.swing.JLabel verticalAlignmentLabel

contentPanel
```
javax.swing.JPanel contentPanel
```
insetsPanel
```
javax.swing.JPanel insetsPanel
```

rightInsetSpinnerModel

javax.swing.SpinnerNumberModel rightInsetSpinnerModel

topInsetSpinnerModel

javax.swing.SpinnerNumberModel topInsetSpinnerModel

bottomInsetSpinnerModel

javax.swing.SpinnerNumberModel bottomInsetSpinnerModel

leftInsetSpinnerModel

javax.swing.SpinnerNumberModel leftInsetSpinnerModel

rightInsetSpinner
```
javax.swing.JSpinner rightInsetSpinner
```
bottomInsetSpinner
```
javax.swing.JSpinner bottomInsetSpinner
```
leftInsetSpinner
```
javax.swing.JSpinner leftInsetSpinner
```
topInsetSpinner
```
javax.swing.JSpinner topInsetSpinner
```

tableModel

org.mlc.swing.layout.FormEditor.GridTableModel tableModel

insetsLabel
```
javax.swing.JLabel insetsLabel
```
componentsLabel
```
javax.swing.JLabel componentsLabel
```

componentPaletteLabel

javax.swing.JLabel componentPaletteLabel

componentPaletteListModel

org.mlc.swing.layout.FormEditor.ComponentPaletteListModel componentPaletteListModel

componentPalette
```
DndList componentPalette
```

componentPaletteScrollPane

javax.swing.JScrollPane componentPaletteScrollPane

componentSelectionListModel

org.mlc.swing.layout.FormEditor.ComponentSelectionListModel componentSelectionListModel

componentList
```
DndList componentList
```

componentListScrollPane

javax.swing.JScrollPane componentListScrollPane

componentListCellRenderer

org.mlc.swing.layout.FormEditor.ComponentListCellRenderer componentListCellRenderer

constraintsSeparator
```
java.awt.Component constraintsSeparator
```
positionsSeparator
```
java.awt.Component positionsSeparator
```
componentsPanel
```
javax.swing.JPanel componentsPanel
```
propertiesPanel
```
javax.swing.JPanel propertiesPanel
```

componentsSplitPane

javax.swing.JSplitPane componentsSplitPane

colSpecField
```
javax.swing.JTextField colSpecField
```
rowSpecField
```
javax.swing.JTextField rowSpecField
```
newComponents
```
java.util.Set<E> newComponents
```

layoutConstraintsManager

LayoutConstraintsManager layoutConstraintsManager

toolbar
```
javax.swing.JToolBar toolbar
```
newComponentButton
```
javax.swing.JButton newComponentButton
```

removeComponentButton

javax.swing.JButton removeComponentButton

columnDeleteButton
```
javax.swing.JButton columnDeleteButton
```

columnInsertAfterButton

javax.swing.JButton columnInsertAfterButton

columnInsertBeforeButton

javax.swing.JButton columnInsertBeforeButton

rowDeleteButton
```
javax.swing.JButton rowDeleteButton
```

rowInsertBeforeButton

javax.swing.JButton rowInsertBeforeButton

rowInsertAfterButton

javax.swing.JButton rowInsertAfterButton

container
```
java.awt.Container container
```
containerLayout
```
ContainerLayout containerLayout
```
layoutFrame
```
MultiContainerFrame layoutFrame
```
table
```
org.mlc.swing.layout.DnDTable table
```
tableScrollPane
```
javax.swing.JScrollPane tableScrollPane
```

constraintsSplitPane

javax.swing.JSplitPane constraintsSplitPane

topComponent
```
java.awt.Component topComponent
```
suspendConstraintControlUpdates
```
boolean suspendConstraintControlUpdates
```
formComponent
```
java.awt.Component formComponent
```

Class org.mlc.swing.layout.LayoutFrame extends javax.swing.JFrame implements Serializable

Serialized Fields

constraintsManager

LayoutConstraintsManager constraintsManager

menuBar
```
javax.swing.JMenuBar menuBar
```
actionMenu
```
javax.swing.JMenu actionMenu
```
saveXML
```
javax.swing.JMenuItem saveXML
```
viewCode
```
javax.swing.JMenuItem viewCode
```
exit
```
javax.swing.JMenuItem exit
```
viewMenu
```
javax.swing.JMenu viewMenu
```

viewDebugMenu

javax.swing.JCheckBoxMenuItem viewDebugMenu

fileChooser
```
javax.swing.JFileChooser fileChooser
```
editors
```
java.util.Map<K,V> editors
```
tabs
```
javax.swing.JTabbedPane tabs
```
layoutToTab
```
java.util.Map<K,V> layoutToTab
```
newLayouts
```
java.util.List<E> newLayouts
```
dframe
```
javax.swing.JFrame dframe
```

Class org.mlc.swing.layout.NewComponentDialog extends javax.swing.JPanel implements Serializable

Serialized Fields

componentNameLabel
```
javax.swing.JLabel componentNameLabel
```

componentNameTextField

javax.swing.JTextField componentNameTextField

importsLabel
```
javax.swing.JLabel importsLabel
```
importsComponent
```
javax.swing.JTextArea importsComponent
```
declarationsLabel
```
javax.swing.JLabel declarationsLabel
```

declarationsComponent

javax.swing.JTextArea declarationsComponent

configureLabel
```
javax.swing.JLabel configureLabel
```

configureComponent

javax.swing.JTextArea configureComponent

addToContainerLabel
```
javax.swing.JLabel addToContainerLabel
```

addToContainerComponent

javax.swing.JTextArea addToContainerComponent

removeFromContainerLabel

javax.swing.JLabel removeFromContainerLabel

removeFromContainerComponent

javax.swing.JTextArea removeFromContainerComponent

previewLabel
```
javax.swing.JLabel previewLabel
```

previewComponent

javax.swing.JScrollPane previewComponent

prevButton
```
javax.swing.JButton prevButton
```
okButton
```
javax.swing.JButton okButton
```
cancelButton
```
javax.swing.JButton cancelButton
```
buttonBar
```
java.awt.Component buttonBar
```
componentDef
```
ComponentDef componentDef
```
preview
```
java.lang.String preview
```
myOwner
```
java.awt.Window myOwner
```
success
```
boolean success
```

Package org.ptolemy.commons
- Class org.ptolemy.commons.FutureValue extends java.lang.Object implements Serializable
  - Serialized Fields
    - _result
```
java.lang.Object _result
```
      The result to return from get()
    - _exception
```
java.lang.Throwable _exception
```
      The exception to throw from get()
    - _state
```
int _state
```
      The current state of the future
- Class org.ptolemy.commons.ThreeDigitVersionSpecification extends VersionSpecification implements Serializable
  
  serialVersionUID:
  
  -383837397410414307L
  - Serialized Fields
    - _major
```
int _major
```
    - _minor
```
int _minor
```
    - _micro
```
int _micro
```
    - _qualifiers
```
java.lang.String[] _qualifiers
```
      An optional array of arbitrary version qualifiers
- Class org.ptolemy.commons.VersionSpecification extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  4728405057895700793L
  - Serialized Fields
    - _versionString
```
java.lang.String _versionString
```
      The version string.
Package org.sdm.spa
- Class org.sdm.spa.TextualInteractionShell.ShellFrame extends ExpressionShellFrame implements Serializable
Package org.sdm.spa.actors.piw.viz
- Class org.sdm.spa.actors.piw.viz.DetailPanel extends diva.canvas.JCanvas implements Serializable
  
  serialVersionUID:
  
  3257288028421894961L
  - Serialized Fields
    - _startViewPort
```
int _startViewPort
```
    - _sizeViewPort
```
int _sizeViewPort
```
    - _sequenceCollection
```
SequenceCollection _sequenceCollection
```
    - _siteCollection
```
SiteCollection _siteCollection
```
- Class org.sdm.spa.actors.piw.viz.OverviewPanel extends diva.canvas.JCanvas implements Serializable
  
  serialVersionUID:
  
  3257288041205608504L
  - Serialized Fields
    - _listenerViewPortMove
```
java.awt.event.ActionListener _listenerViewPortMove
```
    - _listenerSequenceMove
```
java.awt.event.ActionListener _listenerSequenceMove
```
    - _viewPort
```
diva.canvas.Figure _viewPort
```
    - _sizeViewPort
```
int _sizeViewPort
```
    - _sequenceCollection
```
SequenceCollection _sequenceCollection
```
    - _siteCollection
```
SiteCollection _siteCollection
```
- Class org.sdm.spa.actors.piw.viz.SitesPanel extends javax.swing.JPanel implements Serializable
  
  serialVersionUID:
  
  3977297702998454328L
  - Serialized Fields
    - _sequenceCollection
```
SequenceCollection _sequenceCollection
```
    - _siteCollection
```
SiteCollection _siteCollection
```
    - _listenerSiteChange
```
java.awt.event.ActionListener _listenerSiteChange
```
Package org.sdm.spa.gui
- Class org.sdm.spa.gui.DoubleShellTAPTableauFrame extends TableauFrame implements Serializable
- Class org.sdm.spa.gui.DoubleShellTextAreaPanel extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - shell1
```
javax.swing.JTextArea shell1
```
    - shell2
```
javax.swing.JTextArea shell2
```
    - mainPrompt
```
java.lang.String mainPrompt
```
      Main prompt.
    - historyLength
```
int historyLength
```
      Size of the history to keep.
    - _initialMessage
```
java.lang.String _initialMessage
```
    - _greetSh1
```
java.lang.String _greetSh1
```
    - _promptCursor
```
int _promptCursor
```
    - contPrompt
```
java.lang.String contPrompt
```
      Prompt to use on continuation lines.
    - _commandBuffer
```
java.lang.StringBuffer _commandBuffer
```
    - _interpreter
```
ShellInterpreter _interpreter
```
    - _historyCursor
```
int _historyCursor
```
    - _historyCommands
```
java.util.Vector<E> _historyCommands
```
- Class org.sdm.spa.gui.UserInteractiveShell.ShellFrame extends DoubleShellTAPTableauFrame implements Serializable
- Class org.sdm.spa.gui.XMLUIP extends javax.swing.JPanel implements Serializable
Package ptolemy.actor
- Class ptolemy.actor.InvariantViolationException extends IllegalActionException implements Serializable
- Class ptolemy.actor.NoRoomException extends KernelRuntimeException implements Serializable
- Class ptolemy.actor.NoTokenException extends KernelRuntimeException implements Serializable
- Class ptolemy.actor.TypeConflictException extends KernelException implements Serializable
  - Serialized Fields
    - _inequalities
```
java.util.List<E> _inequalities
```
- Class ptolemy.actor.TypedIOPort.RunTimeTypeCheckException extends IllegalActionException implements Serializable
  - Serialized Fields
    - _port
```
TypedIOPort _port
```
    - _token
```
Token _token
```
Package ptolemy.actor.gui
- Class ptolemy.actor.gui.ArrayOfRecordsPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - table
```
javax.swing.JTable table
```
      The table representing the matrix.
- Class ptolemy.actor.gui.ArrayOfRecordsPane.ArrayAsTable extends javax.swing.table.AbstractTableModel implements Serializable
  - Serialized Fields
    - _array
```
ArrayToken _array
```
      The array for which a Table Model is created.
    - _columns
```
java.util.List<E> _columns
```
      The column names found in the array.
- Class ptolemy.actor.gui.Configurer extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _originalValues
```
java.util.HashMap<K,V> _originalValues
```
      A record of the original values.
    - _closeListeners
```
java.util.List<E> _closeListeners
```
    - _object
```
NamedObj _object
```
- Class ptolemy.actor.gui.Console.ConsoleFrame extends TextEditor implements Serializable
- Class ptolemy.actor.gui.DebugListenerTableau.DebugListenerFrame extends TextEditor implements Serializable
- Class ptolemy.actor.gui.EditParametersDialog extends ComponentDialog implements Serializable
  - Serialized Fields
    - _owner
```
java.awt.Frame _owner
```
      The owner window.
    - _query
```
Query _query
```
      The query window for adding parameters.
    - _target
```
NamedObj _target
```
      The target object whose parameters are being edited.
- Class ptolemy.actor.gui.ExpressionShellFrame extends TableauFrame implements Serializable
- Class ptolemy.actor.gui.HTMLViewer extends TableauFrame implements Serializable
  - Serialized Fields
    - pane
```
javax.swing.JEditorPane pane
```
      The text pane.
    - _scroller
```
javax.swing.JScrollPane _scroller
```
      The main scroll pane.
    - _base
```
java.net.URL _base
```
      The base as specified by setBase().
- Class ptolemy.actor.gui.JVMTableau.JVMFrame extends PtolemyFrame implements Serializable
- Class ptolemy.actor.gui.MatrixPane extends javax.swing.JScrollPane implements Serializable
  - Serialized Fields
    - table
```
javax.swing.JTable table
```
      The table representing the matrix. Methods in the class referred to by this field should only be invoked from the Swing event thread. See SwingUtilities.invokeLater().
- Class ptolemy.actor.gui.ModelFrame extends PtolemyFrame implements Serializable
  - Serialized Fields
    - _pane
```
ModelPane _pane
```
    - _previousState
```
Manager.State _previousState
```
      The previous state of the manager, to avoid reporting it if it hasn't changed.
    - _previousStatusMessage
```
java.lang.String _previousStatusMessage
```
      The Manager status message from the previous state.
- Class ptolemy.actor.gui.ModelPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _displays
```
java.awt.Container _displays
```
      A panel into which to place model displays.
    - _buttonPanel
```
javax.swing.JPanel _buttonPanel
```
    - _controlPanel
```
javax.swing.JPanel _controlPanel
```
    - _directorQuery
```
Configurer _directorQuery
```
    - _goButton
```
javax.swing.JButton _goButton
```
    - _layout
```
int _layout
```
    - _manager
```
Manager _manager
```
    - _model
```
CompositeActor _model
```
    - _parameterQuery
```
Configurer _parameterQuery
```
    - _stopButton
```
javax.swing.JButton _stopButton
```
    - _pauseButton
```
javax.swing.JButton _pauseButton
```
    - _resumeButton
```
javax.swing.JButton _resumeButton
```
    - _show
```
int _show
```
- Class ptolemy.actor.gui.MoMLApplet extends PtolemyApplet implements Serializable
  - Serialized Fields
    - _fragment
```
java.lang.String _fragment
```
      The fragment of the modelURL, if any. This field is set after _readMoMLAppletParameter() is called.
    - _modelURL
```
java.lang.String _modelURL
```
      The modelURL. This field is set after _readMoMLAppletParameter() is called.
- Class ptolemy.actor.gui.OpenInstanceDialog extends PtolemyDialog implements Serializable
  - Serialized Fields
    - _columnNames
```
java.util.ArrayList<E> _columnNames
```
      List of names of columns that will be used for this target.
    - _parameters
```
java.util.List<E> _parameters
```
      The target parameter list.
    - _parameterTable
```
javax.swing.JTable _parameterTable
```
      Table of parameters.
    - _parameterTableModel
```
ptolemy.actor.gui.OpenInstanceDialog.ParametersTableModel _parameterTableModel
```
      The table model.
- Class ptolemy.actor.gui.PlotTableauFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - plot
```
PlotBox plot
```
      The plot object held by this frame.
    - _directory
```
java.io.File _directory
```
      Directory that contains the input file.
    - _exportPDFAction
```
javax.swing.Action _exportPDFAction
```
      The export to PDF action.
    - _editMenu
```
javax.swing.JMenu _editMenu
```
      Edit menu for this frame.
    - _exportGIFAction
```
javax.swing.Action _exportGIFAction
```
      The export to GIF action.
    - _exportPNGAction
```
javax.swing.Action _exportPNGAction
```
      The export to PNG action.
    - _file
```
java.io.File _file
```
      The input file.
    - _specialMenu
```
javax.swing.JMenu _specialMenu
```
      Special menu for this frame.
- Class ptolemy.actor.gui.PlotTableauFrame.ExportImageAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _formatName
```
java.lang.String _formatName
```
- Class ptolemy.actor.gui.PortConfigurer extends Query implements Serializable
  - Serialized Fields
    - _cardinals
```
java.lang.String[] _cardinals
```
      Deprecated.
    - _changed
```
java.util.Set<E> _changed
```
      Deprecated.
    - _object
```
Entity<T extends Port> _object
```
      Deprecated.
    - _optionsArray
```
java.lang.String[] _optionsArray
```
      Deprecated.
- Class ptolemy.actor.gui.PortConfigurerDialog extends PtolemyDialog implements Serializable
  - Serialized Fields
    - _columnNames
```
java.util.ArrayList<E> _columnNames
```
      List of names of columns that will be used for this target.
    - _hideAllPorts
```
boolean _hideAllPorts
```
      When you click on the "Hide" column header, toggle this value.
      
      See Also:
      
      PortConfigurerDialog.PortTableModel.toggleHidePorts()
    - _portLocationComboBox
```
javax.swing.JComboBox<E> _portLocationComboBox
```
      The combination box used to select the location of a port.
    - _portTable
```
javax.swing.JTable _portTable
```
    - _portTableModel
```
ptolemy.actor.gui.PortConfigurerDialog.PortTableModel _portTableModel
```
    - _jth
```
javax.swing.table.JTableHeader _jth
```
      JTableHeader of _portTable. MouseListener is added to this.
    - _ports
```
java.util.Vector<E> _ports
```
    - _selectedRow
```
int _selectedRow
```
    - _showAllNames
```
boolean _showAllNames
```
      When you click on the "Show Name" column header, toggle this value.
      
      See Also:
      
      PortConfigurerDialog.PortTableModel.toggleShowAllNames()
    - _applyButton
```
javax.swing.JButton _applyButton
```
      The various buttons.
    - Button
```
javax.swing.JButton Button
```
      The various buttons.
    - _addButton
```
javax.swing.JButton _addButton
```
      The various buttons.
    - _applyChangeRequestFailed
```
boolean _applyChangeRequestFailed
```
      True if the change request in _apply() failed
    - _removeButton
```
javax.swing.JButton _removeButton
```
      The various buttons.
- Class ptolemy.actor.gui.PortConfigurerDialog.ValidatingComboBoxCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - _comboBox
```
javax.swing.JComboBox<E> _comboBox
```
      The combo box.
    - _oldValue
```
java.lang.Object _oldValue
```
      Old value of the combo box.
    - _userWantsToEdit
```
boolean _userWantsToEdit
```
      True if the user wants to edit after having an invalid selection.
    - _validator
```
ptolemy.actor.gui.PortConfigurerDialog.CellValidator _validator
```
      Class that validates the cell.
- Class ptolemy.actor.gui.PortConfigurerDialog.ValidatingJTextFieldCellEditor extends javax.swing.DefaultCellEditor implements Serializable
  - Serialized Fields
    - _jFormattedTextField
```
javax.swing.JFormattedTextField _jFormattedTextField
```
      The JTextField.
    - _oldValue
```
java.lang.Object _oldValue
```
      Old value of the JTextField.
    - _userWantsToEdit
```
boolean _userWantsToEdit
```
      True if the user wants to edit after having an invalid selection.
    - _validator
```
ptolemy.actor.gui.PortConfigurerDialog.CellValidator _validator
```
      Class that validates the cell.
- Class ptolemy.actor.gui.PtolemyApplet extends BasicJApplet implements Serializable
  - Serialized Fields
    - _manager
```
Manager _manager
```
      The manager, created in the init() method.
    - _setupOK
```
boolean _setupOK
```
      Set this to false if the setup of the model during the init() method fails. This prevents the model from executing.
    - _toplevel
```
NamedObj _toplevel
```
      The top-level composite actor, created in the init() method.
    - _workspace
```
Workspace _workspace
```
      The workspace that the applet is built in. Each applet has it own workspace.
    - _goButton
```
javax.swing.JButton _goButton
```
    - _stopButton
```
javax.swing.JButton _stopButton
```
    - _previousState
```
Manager.State _previousState
```
- Class ptolemy.actor.gui.PtolemyDialog extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
      The configuration that corresponds with this dialog. The configuration is used to properly display the help text.
    - _helpButton
```
javax.swing.JButton _helpButton
```
      The help button.
    - _cancelButton
```
javax.swing.JButton _cancelButton
```
      The cancel button.
    - _contents
```
javax.swing.JComponent _contents
```
    - _dirty
```
boolean _dirty
```
      The following is true if any of the values have been changed but not applied.
    - _dialogTableau
```
DialogTableau _dialogTableau
```
    - _owner
```
java.awt.Frame _owner
```
    - _target
```
Entity<T extends Port> _target
```
- Class ptolemy.actor.gui.PtolemyFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - _query
```
Query _query
```
      The query used to specify save as options.
    - _model
```
NamedObj _model
```
- Class ptolemy.actor.gui.PtolemyQuery extends Query implements Serializable
  - Serialized Fields
    - _attributes
```
java.util.Map<K,V> _attributes
```
      Maps an entry name to the attribute that is attached to it.
    - _addingStyledEntryFor
```
Settable _addingStyledEntryFor
```
    - _dialog
```
ComponentDialog _dialog
```
    - _handler
```
NamedObj _handler
```
    - _ignoreChangeNotifications
```
boolean _ignoreChangeNotifications
```
    - _isOpenErrorWindow
```
boolean _isOpenErrorWindow
```
    - _query
```
PtolemyQuery _query
```
    - _revertValue
```
java.util.Map<K,V> _revertValue
```
    - _savedErrorHandler
```
ErrorHandler _savedErrorHandler
```
    - _varToListOfEntries
```
java.util.Map<K,V> _varToListOfEntries
```
- Class ptolemy.actor.gui.PtolemyQuery.ActionableEntry extends javax.swing.Box implements Serializable
  - Serialized Fields
    - _actionable
```
Actionable _actionable
```
    - _button
```
javax.swing.JButton _button
```
    - _entryBox
```
javax.swing.JTextField _entryBox
```
    - _owner
```
Query _owner
```
- Class ptolemy.actor.gui.PtolemyQuery.HierarchicalConfigurer extends javax.swing.Box implements Serializable
  - Serialized Fields
    - _owner
```
Query _owner
```
    - _parameter
```
Settable _parameter
```
- Class ptolemy.actor.gui.RenameConfigurer extends Query implements Serializable
  - Serialized Fields
    - _changed
```
boolean _changed
```
    - _object
```
NamedObj _object
```
- Class ptolemy.actor.gui.RenameDialog extends ComponentDialog implements Serializable
- Class ptolemy.actor.gui.RunTableau.RunFrame extends ModelFrame implements Serializable
  - Serialized Fields
    - _debugMenu
```
javax.swing.JMenu _debugMenu
```
      Debug menu for this frame.
- Class ptolemy.actor.gui.TableauFrame extends Top implements Serializable
  - Serialized Fields
    - aboutFile
```
java.lang.String aboutFile
```
      The name of the default file to open when About is invoked. This file should be relative to the home installation directory. This file is used if the configuration does not specify an about file.
    - helpFile
```
java.lang.String helpFile
```
      The name of the default file to open when Help is invoked. This file should be relative to the home installation directory. This file is used if the configuration does not specify a help file.
    - _initialSaveAsFileName
```
java.lang.String _initialSaveAsFileName
```
      The initial filename to use in the SaveAs dialog.
    - _viewMenu
```
javax.swing.JMenu _viewMenu
```
      The view menu. Note that this is only created if there are multiple views, so if derived classes use it, they must test to see whether it is null.
    - _factoryContainer
```
TableauFactory _factoryContainer
```
    - _tableau
```
Tableau _tableau
```
    - _placeable
```
Placeable _placeable
```
      Associated placeable.
    - _portablePlaceable
```
PortablePlaceable _portablePlaceable
```
      Associated portablePlaceable.
    - _packCalled
```
boolean _packCalled
```
      Set to true when the pack() method is called. Used by TopPack.pack().
    - _topPack
```
TopPack _topPack
```
      Set in pack() if an alternate topPack is used.
    - _newMenuItems
```
java.util.Vector<E> _newMenuItems
```
      A vector to keep track of ActionListeners on menu items.
- Class ptolemy.actor.gui.TextEditor extends TableauFrame implements Serializable
  - Serialized Fields
    - text
```
javax.swing.JTextArea text
```
      The text area.
    - _editMenu
```
javax.swing.JMenu _editMenu
```
      The edit menu.
    - _exportGIFAction
```
javax.swing.Action _exportGIFAction
```
      The export to GIF action.
    - _exportPNGAction
```
javax.swing.Action _exportPNGAction
```
      The export to PNG action.
    - _scrollPane
```
javax.swing.JScrollPane _scrollPane
```
      The scroll pane containing the text area.
    - _undo
```
UndoListener _undo
```
      The undo listener.
    - _findAction
```
javax.swing.Action _findAction
```
      Action to find and replace.
    - _query
```
Query _query
```
      Find and replace query, or null if there is none.
    - _previousReplacement
```
java.lang.String _previousReplacement
```
      Previous replacement string, if any.
    - _previousSearch
```
java.lang.String _previousSearch
```
      Previous search string, if any.
- Class ptolemy.actor.gui.TextEditor.ExportImageAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _formatName
```
java.lang.String _formatName
```
- Class ptolemy.actor.gui.WelcomeWindow extends HTMLViewer implements Serializable
  - Serialized Fields
    - _closePanel
```
javax.swing.JPanel _closePanel
```
      The panel at the bottom that contains the "Show this dialog on startup" checkbox and the close button.
    - _showWelcomeWindowAtStartup
```
BooleanToken _showWelcomeWindowAtStartup
```
      True if the welcome window is shown at startup.
    - _startupCheck
```
javax.swing.JCheckBox _startupCheck
```
    - _closeButton
```
javax.swing.JButton _closeButton
```
Package ptolemy.actor.gui.exec
- Class ptolemy.actor.gui.exec.ExecShellTableau.ExecShellFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - shellTextArea
```
ShellTextArea shellTextArea
```
      The text area tableau used for input and output.
Package ptolemy.actor.gui.ptjacl
- Class ptolemy.actor.gui.ptjacl.TclShellTableau.TclShellFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - shellTextArea
```
ShellTextArea shellTextArea
```
      The text area tableau used for input and output.
Package ptolemy.actor.gui.python
- Class ptolemy.actor.gui.python.PythonShellTableau.PythonShellFrame extends TableauFrame implements Serializable
Package ptolemy.actor.gui.run
- Class ptolemy.actor.gui.run.CustomizableRunFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - _customizeMenu
```
javax.swing.JMenu _customizeMenu
```
      Customize menu for this frame.
    - _pane
```
CustomizableRunPane _pane
```
      The pane inside this frame.
    - _model
```
CompositeActor _model
```
      The associated model.
- Class ptolemy.actor.gui.run.CustomizableRunPane extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _model
```
CompositeActor _model
```
      The associated model.
    - _layoutConstraintsManager
```
LayoutConstraintsManager _layoutConstraintsManager
```
      The layout constraint manager.
    - _subpanels
```
java.util.HashMap<K,V> _subpanels
```
      A collection of subpanels.
- Class ptolemy.actor.gui.run.PaletteList extends javax.swing.JList implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - fDragSource
```
java.awt.dnd.DragSource fDragSource
```
      The source of the drag.
    - editor
```
PtolemyFormEditor editor
```
- Class ptolemy.actor.gui.run.PtolemyFormEditor extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _containerLayout
```
ContainerLayout _containerLayout
```
      The layout manager.
    - _container
```
java.awt.Container _container
```
      The container.
    - newComponents
```
java.util.Set<E> newComponents
```
      The set of new components.
    - topComponent
```
java.awt.Component topComponent
```
      The top level component.
    - _bottomInsetSpinnerModel
```
javax.swing.SpinnerNumberModel _bottomInsetSpinnerModel
```
      Model for the bottom inset control.
    - _bottomInsetSpinner
```
javax.swing.JSpinner _bottomInsetSpinner
```
      The bottom inset control.
    - _columnDeleteButton
```
javax.swing.JButton _columnDeleteButton
```
      The button to delete a column.
    - _columnInsertAfterButton
```
javax.swing.JButton _columnInsertAfterButton
```
      The button to insert after the selected column.
    - _columnInsertBeforeButton
```
javax.swing.JButton _columnInsertBeforeButton
```
      The button to insert before the selected column.
    - _columnSpanSpinnerModel
```
ptolemy.actor.gui.run.PtolemyFormEditor.ColSpanSpinnerModel _columnSpanSpinnerModel
```
      The model for the column span control.
    - _columnSpanSpinner
```
javax.swing.JSpinner _columnSpanSpinner
```
      The column span control.
    - _horizontalAlignmentList
```
java.lang.String[] _horizontalAlignmentList
```
      The list of horizontal alignment options.
    - _horizontalAlignmentCombo
```
javax.swing.JComboBox<E> _horizontalAlignmentCombo
```
      The horizontal alignment control.
    - _layoutFrame
```
RunLayoutFrame _layoutFrame
```
      The layout frame.
    - _leftInsetSpinnerModel
```
javax.swing.SpinnerNumberModel _leftInsetSpinnerModel
```
      Model for the left inset control.
    - _leftInsetSpinner
```
javax.swing.JSpinner _leftInsetSpinner
```
      The left inset control.
    - _packAction
```
javax.swing.Action _packAction
```
      Action to pack the run control window.
    - _removeComponentAction
```
javax.swing.Action _removeComponentAction
```
      Action to remove a component.
    - _removeComponentButton
```
javax.swing.JButton _removeComponentButton
```
      Button to remove a component.
    - _rightInsetSpinnerModel
```
javax.swing.SpinnerNumberModel _rightInsetSpinnerModel
```
      Model for the right inset control.
    - _rightInsetSpinner
```
javax.swing.JSpinner _rightInsetSpinner
```
      The right inset control.
    - _rowDeleteButton
```
javax.swing.JButton _rowDeleteButton
```
      The button to delete a row.
    - _rowInsertAfterButton
```
javax.swing.JButton _rowInsertAfterButton
```
      The button to insert a row after the selected one.
    - _rowInsertBeforeButton
```
javax.swing.JButton _rowInsertBeforeButton
```
      The button to insert a row before the selected one.
    - _rowSpanSpinnerModel
```
ptolemy.actor.gui.run.PtolemyFormEditor.RowSpanSpinnerModel _rowSpanSpinnerModel
```
      The model for the row span control.
    - _rowSpanSpinner
```
javax.swing.JSpinner _rowSpanSpinner
```
      The row span control.
    - _suspendConstraintControlUpdates
```
boolean _suspendConstraintControlUpdates
```
      Flag to suspend updates.
    - _table
```
ptolemy.actor.gui.run.LayoutTable _table
```
      The layout table, built in the constructor.
    - _tableModel
```
ptolemy.actor.gui.run.PtolemyFormEditor.GridTableModel _tableModel
```
      The data model for the table.
    - _topInsetSpinnerModel
```
javax.swing.SpinnerNumberModel _topInsetSpinnerModel
```
      Model for the top inset control.
    - _topInsetSpinner
```
javax.swing.JSpinner _topInsetSpinner
```
      The top inset control.
    - _verticalAlignmentList
```
java.lang.String[] _verticalAlignmentList
```
      The list of vertical alignment options.
    - _verticalAlignmentCombo
```
javax.swing.JComboBox<E> _verticalAlignmentCombo
```
      The vertical alignment control.
- Class ptolemy.actor.gui.run.RunLayoutFrame extends TableauFrame implements Serializable
  - Serialized Fields
    - _pane
```
CustomizableRunPane _pane
```
      The run pane whose layout is being edited.
    - _model
```
CompositeActor _model
```
      The associated model.
    - _constraintsManager
```
LayoutConstraintsManager _constraintsManager
```
      The constraints manager being edited.
    - _editors
```
java.util.Map<K,V> _editors
```
      Set of editors indexed by layout.
    - _newLayouts
```
java.util.List<E> _newLayouts
```
      A list of new layouts.
    - _tabs
```
javax.swing.JTabbedPane _tabs
```
      Tabbed pane for showing nested layouts.
Package ptolemy.actor.gui.style
- Class ptolemy.actor.gui.style.StyleConfigurer extends Query implements Serializable
  - Serialized Fields
    - _object
```
NamedObj _object
```
    - _originalExpertMode
```
boolean _originalExpertMode
```
    - _originalValues
```
java.util.Map<K,V> _originalValues
```
    - _parameterStyles
```
ParameterEditorStyle[] _parameterStyles
```
Package ptolemy.actor.gui.syntax
- Class ptolemy.actor.gui.syntax.SyntaxTextEditor extends TextEditor implements Serializable
- Class ptolemy.actor.gui.syntax.SyntaxTextEditorForStringAttributes extends TextEditorForStringAttributes implements Serializable
Package ptolemy.actor.lib.gem5
- Class ptolemy.actor.lib.gem5.Gem5Wrapper.SortByCommandTime extends java.lang.Object implements Serializable
Package ptolemy.actor.lib.gui
- Class ptolemy.actor.lib.gui.InteractiveDialog.DialogFrame extends TableauFrame implements Serializable
- Class ptolemy.actor.lib.gui.InteractiveShell.ShellFrame extends ExpressionShellFrame implements Serializable
- Class ptolemy.actor.lib.gui.SliderSource.SliderFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _slider
```
javax.swing.JSlider _slider
```
Package ptolemy.actor.lib.image
- Class ptolemy.actor.lib.image.ImageDisplayJavaSE.ImageWindow extends TableauFrame implements Serializable
Package ptolemy.actor.process
- Class ptolemy.actor.process.TerminateProcessException extends java.lang.RuntimeException implements Serializable
  - Serialized Fields
    - _message
```
java.lang.String _message
```
Package ptolemy.actor.sched
- Class ptolemy.actor.sched.NotSchedulableException extends InvalidStateException implements Serializable
Package ptolemy.data.expr
- Class ptolemy.data.expr.ParseException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - currentToken
```
Token currentToken
```
      This is the last token that has been consumed successfully. If this object has been created due to a parse error, the token followng this token will (therefore) be the first error token.
    - expectedTokenSequences
```
int[][] expectedTokenSequences
```
      Each entry in this array is an array of integers. Each array of integers represents a sequence of tokens (by their ordinal values) that is expected at this point of the parse.
    - tokenImage
```
java.lang.String[] tokenImage
```
      This is a reference to the "tokenImage" array of the generated parser within which the parse error occurred. This array is defined in the generated ...Constants interface.
    - eol
```
java.lang.String eol
```
      The end of line string for this machine.
- Class ptolemy.data.expr.Token extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - kind
```
int kind
```
      An integer that describes the kind of this token. This numbering system is determined by JavaCCParser, and a table of these numbers is stored in the file ...Constants.java.
    - beginLine
```
int beginLine
```
      The line number of the first character of this Token.
    - beginColumn
```
int beginColumn
```
      The column number of the first character of this Token.
    - endLine
```
int endLine
```
      The line number of the last character of this Token.
    - endColumn
```
int endColumn
```
      The column number of the last character of this Token.
    - image
```
java.lang.String image
```
      The string image of the token.
    - next
```
Token next
```
      A reference to the next regular (non-special) token from the input stream. If this is the last token from the input stream, or if the token manager has not read tokens beyond this one, this field is set to null. This is true only if this token is also a regular token. Otherwise, see below for a description of the contents of this field.
    - specialToken
```
Token specialToken
```
      This field is used to access special tokens that occur prior to this token, but after the immediately preceding regular (non-special) token. If there are no such special tokens, this field is set to null. When there are more than one such special token, this field refers to the last of these special tokens, which in turn refers to the next previous special token through its specialToken field, and so on until the first special token (whose specialToken field is null). The next fields of special tokens refer to other special tokens that immediately follow it (without an intervening regular token). If there is no such token, this field is null.
- Class ptolemy.data.expr.TokenMgrError extends java.lang.Error implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - errorCode
```
int errorCode
```
      Indicates the reason why the exception is thrown. It will have one of the above 4 values.
- Class ptolemy.data.expr.UndefinedConstantOrIdentifierException extends IllegalActionException implements Serializable
  - Serialized Fields
    - _nodeName
```
java.lang.String _nodeName
```
      The name of the missing constant or identifier.
- Class ptolemy.data.expr.UnknownResultException extends KernelRuntimeException implements Serializable
- Class ptolemy.data.expr.Variable.CircularDependencyError extends IllegalActionException implements Serializable
Package ptolemy.domains.modal.kernel
- Class ptolemy.domains.modal.kernel.MultipleEnabledTransitionsException extends IllegalActionException implements Serializable
Package ptolemy.domains.sdf.demo.HTVQ
- Class ptolemy.domains.sdf.demo.HTVQ.HTVQApplet extends MoMLApplet implements Serializable
Package ptolemy.domains.sdf.demo.Sketch
- Class ptolemy.domains.sdf.demo.Sketch.SketchApplet extends MoMLApplet implements Serializable
  - Serialized Fields
    - _sketchedSource
```
SketchedSource _sketchedSource
```
      The SketchedSource actor.
Package ptolemy.domains.sdf.optimize
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._ListOfActors extends java.util.LinkedList implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._ListOfChannels extends java.util.LinkedList implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._ListOfPorts extends java.util.LinkedList implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._SetOfStates extends java.util.HashSet implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._StateComparator extends java.lang.Object implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._StateComparatorLowestValue extends OptimalScheduleFinder._StateComparator implements Serializable
- Class ptolemy.domains.sdf.optimize.OptimalScheduleFinder._StateComparatorMaximumProgress extends OptimalScheduleFinder._StateComparator implements Serializable
  - Serialized Fields
    - _backupComparator
```
OptimalScheduleFinder._StateComparator _backupComparator
```
      a secondary comparator to break a tie.
Package ptolemy.graph
- Class ptolemy.graph.GraphActionException extends IllegalActionException implements Serializable
- Class ptolemy.graph.GraphConstructionException extends GraphException implements Serializable
- Class ptolemy.graph.GraphElementException extends GraphException implements Serializable
- Class ptolemy.graph.GraphException extends java.lang.RuntimeException implements Serializable
- Class ptolemy.graph.GraphInvalidStateException extends InvalidStateException implements Serializable
- Class ptolemy.graph.GraphStateException extends GraphException implements Serializable
- Class ptolemy.graph.GraphTopologyException extends GraphException implements Serializable
- Class ptolemy.graph.GraphWeightException extends GraphException implements Serializable
Package ptolemy.graph.analysis
- Class ptolemy.graph.analysis.AnalysisException extends java.lang.RuntimeException implements Serializable
- Class ptolemy.graph.analysis.InvalidAnalyzerException extends AnalysisException implements Serializable
Package ptolemy.gui
- Class ptolemy.gui.BasicJApplet extends javax.swing.JApplet implements Serializable
  - Serialized Fields
    - _background
```
java.awt.Color _background
```
      The background color as set by the "background" applet parameter. This is protected so that derived classes can find out what the background color is. Derived classes may wish to know the color so they can match it in some of their components.
- Class ptolemy.gui.CancelException extends java.lang.Exception implements Serializable
- Class ptolemy.gui.ComponentDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - contents
```
java.awt.Component contents
```
      The component contained by this dialog.
    - _buttonPressed
```
java.lang.String _buttonPressed
```
      The label of the button pushed to dismiss the dialog.
    - _windowClosingAdapter
```
ptolemy.gui.ComponentDialog.WindowClosingAdapter _windowClosingAdapter
```
      A reference to the WindowClosingAdapter.
    - _propChangeListener
```
ptolemy.gui.ComponentDialog.PropChangeListener _propChangeListener
```
      A reference to the PropertyChangeListener.
    - _doneHandleClosing
```
boolean _doneHandleClosing
```
      Indicator that we have notified of window closing.
    - _optionPane
```
javax.swing.JOptionPane _optionPane
```
      The pane with the buttons.
    - _messageArea
```
javax.swing.JTextArea _messageArea
```
      The container for messages.
- Class ptolemy.gui.JTextAreaExec extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _clearListener
```
java.awt.event.ActionListener _clearListener
```
    - _interruptListener
```
java.awt.event.ActionListener _interruptListener
```
    - _startListener
```
java.awt.event.ActionListener _startListener
```
    - _cancelButton
```
javax.swing.JButton _cancelButton
```
      The Cancel Button.
    - _clearButton
```
javax.swing.JButton _clearButton
```
      The Clear Button.
    - _commands
```
java.util.List<E> _commands
```
      The list of command to be executed. Each entry in the list is a String. It might be better to have each element of the list be an String [] so that the shell can interpret each word in the command.
    - _debug
```
boolean _debug
```
    - _envp
```
java.lang.String[] _envp
```
      The environment, which is an array of Strings of the form name=value. If this variable is null, then the environment of the calling process is used.
    - _jTextArea
```
javax.swing.JTextArea _jTextArea
```
      JTextArea to write the command and the output of the command.
    - _process
```
java.lang.Process _process
```
      The Process that we are running.
    - _subprocessReturnCode
```
int _subprocessReturnCode
```
      The return code of the last Runtime.exec() command.
    - _progressBar
```
javax.swing.JProgressBar _progressBar
```
      Progress bar where the length of the bar is the total number of commands being run.
    - _statusBar
```
javax.swing.JLabel _statusBar
```
      Label at the bottom that provides feedback as to what is happening.
    - _startButton
```
javax.swing.JButton _startButton
```
      The Start Button.
    - _worker
```
javax.swing.SwingWorker<T,V> _worker
```
      SwingWorker that actually does the work.
    - _workingDirectory
```
java.io.File _workingDirectory
```
      The working directory of the subprocess. If null, then the subprocess is executed in the working directory of the current process.
- Class ptolemy.gui.PtFileChooser extends java.awt.Container implements Serializable
  - Serialized Fields
    - _fileDialog
```
java.awt.FileDialog _fileDialog
```
      The java.awt.FileDialog that is used if _useFileDialog is true.
    - _jFileChooser
```
javax.swing.JFileChooser _jFileChooser
```
      The javax.swing.JFileChooser that is used if _useFileDialog is false.
    - _mode
```
int _mode
```
      The mode of the dialog. One of JFileChooser.OPEN_DIALOG, JFileChooser.SAVE_DIALOG, JFileChooser.CUSTOM_DIALOG. CUSTOM_DIALOG is not supported with FileDialogs.
    - _useFileDialog
```
boolean _useFileDialog
```
      True if PtGUIUtilities.useFileDialog() returned true.
- Class ptolemy.gui.Query extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _background
```
java.awt.Color _background
```
      The background color as set by setBackground(). This defaults to null, which indicates that the background is the same as the container.
    - _constraints
```
java.awt.GridBagConstraints _constraints
```
      Standard constraints for use with _grid.
    - _entries
```
java.util.Map<K,V> _entries
```
      The hashtable of items in the query.
    - _grid
```
java.awt.GridBagLayout _grid
```
      Layout control.
    - _listeners
```
java.util.Vector<E> _listeners
```
      List of registered listeners.
    - _columns
```
int _columns
```
    - _entryPanel
```
javax.swing.JPanel _entryPanel
```
    - _entryScrollPane
```
javax.swing.JScrollPane _entryScrollPane
```
    - _height
```
int _height
```
    - _labels
```
java.util.Map<K,V> _labels
```
    - _leftPadding
```
java.awt.Insets _leftPadding
```
    - _messageArea
```
javax.swing.JTextArea _messageArea
```
    - _messageScrollPane
```
javax.swing.JScrollPane _messageScrollPane
```
    - _messageScrollPaneAdded
```
boolean _messageScrollPaneAdded
```
    - _insets
```
java.awt.Insets _insets
```
    - _previous
```
java.util.Map<K,V> _previous
```
    - _widgetsHeight
```
int _widgetsHeight
```
    - _width
```
int _width
```
- Class ptolemy.gui.Query.QueryColorChooser extends javax.swing.Box implements Serializable
  - Serialized Fields
    - _button
```
javax.swing.JButton _button
```
    - _entryBox
```
javax.swing.JTextField _entryBox
```
    - _name
```
java.lang.String _name
```
    - _owner
```
Query _owner
```
- Class ptolemy.gui.Query.QueryFileChooser extends javax.swing.Box implements Serializable
  - Serialized Fields
    - _owner
```
Query _owner
```
    - _base
```
java.net.URI _base
```
    - _button
```
javax.swing.JButton _button
```
    - _entryBox
```
javax.swing.JTextField _entryBox
```
    - _name
```
java.lang.String _name
```
    - _save
```
boolean _save
```
    - _startingDirectory
```
java.io.File _startingDirectory
```
    - _allowFiles
```
boolean _allowFiles
```
    - _allowDirectories
```
boolean _allowDirectories
```
    - _filter
```
java.io.FilenameFilter _filter
```
- Class ptolemy.gui.QueryChooser extends javax.swing.Box implements Serializable
  - Serialized Fields
    - _owner
```
Query _owner
```
      The owning query.
    - _name
```
java.lang.String _name
```
      The name of the chooser.
    - _foreground
```
java.awt.Color _foreground
```
      The foreground color.
    - _background
```
java.awt.Color _background
```
      The background color.
- Class ptolemy.gui.ShellTextArea extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - mainPrompt
```
java.lang.String mainPrompt
```
      Main prompt.
    - contPrompt
```
java.lang.String contPrompt
```
      Prompt to use on continuation lines.
    - historyLength
```
int historyLength
```
      Size of the history to keep.
    - _commandBuffer
```
java.lang.StringBuffer _commandBuffer
```
    - _jTextArea
```
javax.swing.JTextArea _jTextArea
```
    - _promptCursor
```
int _promptCursor
```
    - _historyCursor
```
int _historyCursor
```
    - _historyCommands
```
java.util.Vector<E> _historyCommands
```
    - _initialMessage
```
java.lang.String _initialMessage
```
    - _interpreter
```
ShellInterpreter _interpreter
```
- Class ptolemy.gui.StatusBar extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _progress
```
javax.swing.JProgressBar _progress
```
    - _progressPanel
```
javax.swing.JPanel _progressPanel
```
    - _message
```
javax.swing.JTextField _message
```
- Class ptolemy.gui.Top extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _exitResult
```
int _exitResult
```
      The return value of the _exit() menu. We use a separate variable here for backward compatibility. The values of this variable are the values returned by _queryForSave.
    - _fileFilter
```
javax.swing.filechooser.FileFilter _fileFilter
```
      The FileFilter that determines what files are displayed by the Open dialog and the Save As dialog The initial default is null, which causes no FileFilter to be applied, which results in all files being displayed.
    - _filenameFilter
```
java.io.FilenameFilter _filenameFilter
```
      The FileFilter used by the java.awt.FileDialog that determines what files are displayed by the Open dialog and the Save As dialog The initial default is null, which causes no FileFilter to be applied, which results in all files being displayed.
      Note that this class can use either java.awt.FileDialog or javax.swing.JFileChooser, so classes should set both _fileFilter and _filenameFilter. Note that it possible to define an inner class that extends javax.swing.filechooser.FileFilter and implements java.io.FilenameFilter and that has two separate accept() methods. This inner class can then be set as the value for both _fileFilter and _filenameFilter:
      ... MyFileFilter myFileFilter = new MyFileFilter(); _fileFilter = myFileFilter; _filenameFilter = myFileFilter; ... static MyFileFilter extends FileFilter implements FilenameFilter { public boolean accept(File file) { // For FileFilter return true; } public boolean accept(File director, String name) { // For FilenameFilter return true; } public String getDescription() { // For FileFilter return "My filter description."; } }
    - _fileMenu
```
javax.swing.JMenu _fileMenu
```
      File menu for this frame.
    - _fileMenuItems
```
javax.swing.JMenuItem[] _fileMenuItems
```
      Items in the file menu. A null element represents a separator.
    - _helpMenu
```
javax.swing.JMenu _helpMenu
```
      Help menu for this frame.
    - _helpMenuItems
```
javax.swing.JMenuItem[] _helpMenuItems
```
      Help menu items.
    - _menubar
```
javax.swing.JMenuBar _menubar
```
      Menubar for this frame.
    - _statusBar
```
StatusBar _statusBar
```
      The status bar.
    - _debugClosing
```
boolean _debugClosing
```
      Set to true to print closing sequence information to standard out.
    - _fileMenuListener
```
ptolemy.gui.Top.FileMenuListener _fileMenuListener
```
      An ActionListener for the menu items in the file menu.
    - _helpMenuListener
```
ptolemy.gui.Top.HelpMenuListener _helpMenuListener
```
      An ActionListener for the menu items in the help menu.
    - _historyMenuListener
```
ptolemy.gui.Top.HistoryMenuListener _historyMenuListener
```
      An ActionListener for the menu items in the history menu.
    - _historyMenu
```
javax.swing.JMenu _historyMenu
```
      A reference to the history menu.
    - _statusBarBackground
```
java.awt.Color _statusBarBackground
```
      The background color of the status bar
    - _centering
```
boolean _centering
```
    - _disposed
```
boolean _disposed
```
      True if this frame has been disposed.
    - _file
```
java.io.File _file
```
      The input file.
    - _hideMenuBar
```
boolean _hideMenuBar
```
      Flag to hide the menu bar.
    - _historyDepth
```
int _historyDepth
```
      History depth.
    - _lastURL
```
java.lang.String _lastURL
```
      The most recently entered URL in Open URL.
    - _lastStatusMessageClearingTask
```
java.util.TimerTask _lastStatusMessageClearingTask
```
      Last status message clearing task.
    - _menuPopulated
```
boolean _menuPopulated
```
      Indicator that the menu has been populated.
    - _modified
```
boolean _modified
```
      Indicator that the data represented in the window has been modified.
    - _statusMessageTimer
```
java.util.Timer _statusMessageTimer
```
      Timer used for status messages.
- Class ptolemy.gui.UndoListener.RedoAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.gui.UndoListener.UndoAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.gui.UserDialog extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _jScrollPane
```
javax.swing.JScrollPane _jScrollPane
```
      The scroll pane containing the output text.
    - _initialMessage
```
java.lang.String _initialMessage
```
    - _interpreter
```
ShellInterpreter _interpreter
```
    - _responseTextArea
```
javax.swing.JTextArea _responseTextArea
```
    - _userInputTextArea
```
javax.swing.JTextArea _userInputTextArea
```
Package ptolemy.gui.demo
- Class ptolemy.gui.demo.FileChooserQuery extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - _query
```
Query _query
```
Package ptolemy.gui.test
- Class ptolemy.gui.test.GraphicalMessageHandlerApplet extends BasicJApplet implements Serializable
- Class ptolemy.gui.test.TopTest extends Top implements Serializable
Package ptolemy.kernel.test
- Class ptolemy.kernel.test.ExampleSystem extends java.lang.Object implements Serializable
  - Serialized Fields
    - e0
```
CompositeEntity e0
```
      Composite Entities that make up the Example System.
    - e3
```
CompositeEntity e3
```
      Composite Entities that make up the Example System.
    - e4
```
CompositeEntity e4
```
      Composite Entities that make up the Example System.
    - e7
```
CompositeEntity e7
```
      Composite Entities that make up the Example System.
    - e10
```
CompositeEntity e10
```
      Composite Entities that make up the Example System.
    - e1
```
ComponentEntity<T extends ComponentPort> e1
```
      Component Entities that make up the Example System.
    - e2
```
ComponentEntity<T extends ComponentPort> e2
```
      Component Entities that make up the Example System.
    - e5
```
ComponentEntity<T extends ComponentPort> e5
```
      Component Entities that make up the Example System.
    - e6
```
ComponentEntity<T extends ComponentPort> e6
```
      Component Entities that make up the Example System.
    - e8
```
ComponentEntity<T extends ComponentPort> e8
```
      Component Entities that make up the Example System.
    - e9
```
ComponentEntity<T extends ComponentPort> e9
```
      Component Entities that make up the Example System.
    - p0
```
ComponentPort p0
```
      Component Ports that make up the Example System.
    - p1
```
ComponentPort p1
```
      Component Ports that make up the Example System.
    - p2
```
ComponentPort p2
```
      Component Ports that make up the Example System.
    - p3
```
ComponentPort p3
```
      Component Ports that make up the Example System.
    - p4
```
ComponentPort p4
```
      Component Ports that make up the Example System.
    - p5
```
ComponentPort p5
```
      Component Ports that make up the Example System.
    - p6
```
ComponentPort p6
```
      Component Ports that make up the Example System.
    - p7
```
ComponentPort p7
```
      Component Ports that make up the Example System.
    - p8
```
ComponentPort p8
```
      Component Ports that make up the Example System.
    - p9
```
ComponentPort p9
```
      Component Ports that make up the Example System.
    - p10
```
ComponentPort p10
```
      Component Ports that make up the Example System.
    - p11
```
ComponentPort p11
```
      Component Ports that make up the Example System.
    - p12
```
ComponentPort p12
```
      Component Ports that make up the Example System.
    - p13
```
ComponentPort p13
```
      Component Ports that make up the Example System.
    - p14
```
ComponentPort p14
```
      Component Ports that make up the Example System.
    - r1
```
ComponentRelation r1
```
      Component Relations that make up the Example System.
    - r2
```
ComponentRelation r2
```
      Component Relations that make up the Example System.
    - r3
```
ComponentRelation r3
```
      Component Relations that make up the Example System.
    - r4
```
ComponentRelation r4
```
      Component Relations that make up the Example System.
    - r5
```
ComponentRelation r5
```
      Component Relations that make up the Example System.
    - r6
```
ComponentRelation r6
```
      Component Relations that make up the Example System.
    - r7
```
ComponentRelation r7
```
      Component Relations that make up the Example System.
    - r8
```
ComponentRelation r8
```
      Component Relations that make up the Example System.
    - r9
```
ComponentRelation r9
```
      Component Relations that make up the Example System.
    - r10
```
ComponentRelation r10
```
      Component Relations that make up the Example System.
    - r11
```
ComponentRelation r11
```
      Component Relations that make up the Example System.
    - r12
```
ComponentRelation r12
```
      Component Relations that make up the Example System.
Package ptolemy.kernel.util
- Class ptolemy.kernel.util.IllegalActionException extends KernelException implements Serializable
- Class ptolemy.kernel.util.InternalErrorException extends KernelRuntimeException implements Serializable
- Class ptolemy.kernel.util.InvalidStateException extends KernelRuntimeException implements Serializable
- Class ptolemy.kernel.util.KernelException extends java.lang.Exception implements Serializable
  - Serialized Fields
    - _message
```
java.lang.String _message
```
    - _cause
```
java.lang.Throwable _cause
```
- Class ptolemy.kernel.util.KernelRuntimeException extends java.lang.RuntimeException implements Serializable
  - Serialized Fields
    - _cause
```
java.lang.Throwable _cause
```
    - _causes
```
java.util.Collection<E> _causes
```
    - _message
```
java.lang.String _message
```
- Class ptolemy.kernel.util.NamedList extends java.lang.Object implements Serializable
  - Serialized Fields
    - _container
```
Nameable _container
```
      The container (owner) of this list.
    - _namedList
```
java.util.LinkedList<E> _namedList
```
      A LinkedList containing the elements.
    - _hashedList
```
java.util.HashMap<K,V> _hashedList
```
      A HashMap linking names to LinkedList entries
    - _hashEnabled
```
boolean _hashEnabled
```
      A boolean indicating that the hashmap was enabled
- Class ptolemy.kernel.util.NameDuplicationException extends KernelException implements Serializable
- Class ptolemy.kernel.util.NoSuchItemException extends KernelException implements Serializable
Package ptolemy.media
- Class ptolemy.media.Picture extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _width
```
int _width
```
    - _height
```
int _height
```
    - _pixels
```
int[] _pixels
```
    - _image
```
java.awt.Image _image
```
    - _imageSource
```
java.awt.image.MemoryImageSource _imageSource
```
Package ptolemy.moml
- Class ptolemy.moml.MissingClassException extends XmlException implements Serializable
  - Serialized Fields
    - _missingClassName
```
java.lang.String _missingClassName
```
      The name of the missing class.
Package ptolemy.moml.unit
- Class ptolemy.moml.unit.ParseException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - currentToken
```
Token currentToken
```
      This is the last token that has been consumed successfully. If this object has been created due to a parse error, the token following this token will (therefore) be the first error token.
    - expectedTokenSequences
```
int[][] expectedTokenSequences
```
      Each entry in this array is an array of integers. Each array of integers represents a sequence of tokens (by their ordinal values) that is expected at this point of the parse.
    - tokenImage
```
java.lang.String[] tokenImage
```
      This is a reference to the "tokenImage" array of the generated parser within which the parse error occurred. This array is defined in the generated ...Constants interface.
    - eol
```
java.lang.String eol
```
      The end of line string for this machine.
- Class ptolemy.moml.unit.Token extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - kind
```
int kind
```
      An integer that describes the kind of this token. This numbering system is determined by JavaCCParser, and a table of these numbers is stored in the file ...Constants.java.
    - beginLine
```
int beginLine
```
      The line number of the first character of this Token.
    - beginColumn
```
int beginColumn
```
      The column number of the first character of this Token.
    - endLine
```
int endLine
```
      The line number of the last character of this Token.
    - endColumn
```
int endColumn
```
      The column number of the last character of this Token.
    - image
```
java.lang.String image
```
      The string image of the token.
    - next
```
Token next
```
      A reference to the next regular (non-special) token from the input stream. If this is the last token from the input stream, or if the token manager has not read tokens beyond this one, this field is set to null. This is true only if this token is also a regular token. Otherwise, see below for a description of the contents of this field.
    - specialToken
```
Token specialToken
```
      This field is used to access special tokens that occur prior to this token, but after the immediately preceding regular (non-special) token. If there are no such special tokens, this field is set to null. When there are more than one such special token, this field refers to the last of these special tokens, which in turn refers to the next previous special token through its specialToken field, and so on until the first special token (whose specialToken field is null). The next fields of special tokens refer to other special tokens that immediately follow it (without an intervening regular token). If there is no such token, this field is null.
- Class ptolemy.moml.unit.TokenMgrError extends java.lang.Error implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - errorCode
```
int errorCode
```
      Indicates the reason why the exception is thrown. It will have one of the above 4 values.
Package ptolemy.plot
- Class ptolemy.plot.CmdLineArgException extends java.lang.Exception implements Serializable
- Class ptolemy.plot.EditablePlot extends Plot implements Serializable
  - Serialized Fields
    - _editSpecX
```
int[] _editSpecX
```
    - _editSpecY
```
int[] _editSpecY
```
    - _editSpecSet
```
boolean[] _editSpecSet
```
    - _currentEditX
```
int _currentEditX
```
    - _currentEditY
```
int _currentEditY
```
    - _dataset
```
int _dataset
```
    - _undoStack
```
java.util.Stack<E> _undoStack
```
    - _redoStack
```
java.util.Stack<E> _redoStack
```
    - _editListeners
```
java.util.Vector<E> _editListeners
```
- Class ptolemy.plot.Histogram extends PlotBox implements Serializable
  - Serialized Fields
    - _currentdataset
```
int _currentdataset
```
      The current dataset.
    - _points
```
java.util.Vector<E> _points
```
      A vector of datasets.
    - _histogram
```
java.util.Vector<E> _histogram
```
      A vector of histogram data.
    - _barwidth
```
double _barwidth
```
      The width of a bar.
    - _baroffset
```
double _baroffset
```
      The offset between bars.
    - _binWidth
```
double _binWidth
```
      The width of a bin.
    - _binOffset
```
double _binOffset
```
      The offset between bins.
    - _needBinRedraw
```
boolean _needBinRedraw
```
    - _needPlotRefill
```
boolean _needPlotRefill
```
    - _scheduledBinsToAdd
```
java.util.ArrayList<E> _scheduledBinsToAdd
```
    - _random
```
java.util.Random _random
```
      Random number generator used to create the sample plot.
    - _showing
```
boolean _showing
```
      Set by _drawPlot(), and reset by clear().
- Class ptolemy.plot.HistogramApplet extends PlotApplet implements Serializable
- Class ptolemy.plot.Plot extends PlotBox implements Serializable
  - Serialized Fields
    - _currentdataset
```
int _currentdataset
```
      The current dataset.
    - _marks
```
int _marks
```
      An indicator of the marks style. See _parseLine method for interpretation.
    - _points
```
java.util.ArrayList<E> _points
```
      A vector of datasets.
    - _markDisconnections
```
boolean _markDisconnections
```
      True when disconnections should be marked.
    - _barOffset
```
double _barOffset
```
      Offset per dataset in x axis units.
    - _bars
```
boolean _bars
```
      True if this is a bar plot.
    - _barWidth
```
double _barWidth
```
      Width of a bar in x axis units.
    - _bins
```
java.util.ArrayList<E> _bins
```
      An arraylist of the bins in the plot. A bin is represents a number of points that are all displayed on the same x position. A bin is meant to avoid superfluous drawings of lines. So instead of having to draw a line between each point, you can draw a line between the minimum and maximum and maximum position.
    - _connected
```
boolean _connected
```
      True if the points are connected.
    - _diameter
```
int _diameter
```
      Give the diameter of a point for efficiency.
    - _firstInSet
```
boolean _firstInSet
```
      Is this the first datapoint in a set?
    - _formats
```
java.util.ArrayList<E> _formats
```
      Format information on a per data set basis.
    - _graphics
```
java.awt.Graphics _graphics
```
      Cached copy of graphics, needed to reset when we are exporting to EPS.
    - _impulses
```
boolean _impulses
```
      True if this is an impulse plot.
    - _lastPointWithExtraDot
```
java.util.HashMap<K,V> _lastPointWithExtraDot
```
    - _lineStyles
```
boolean _lineStyles
```
      True if different line styles should be used.
    - _maxDataset
```
int _maxDataset
```
      The highest data set used.
    - _needBinRedraw
```
boolean _needBinRedraw
```
    - _needPlotRefill
```
boolean _needPlotRefill
```
    - _pointInBinOffset
```
java.util.ArrayList<E> _pointInBinOffset
```
      Points in bins have an absolute index within the virtual array of all points that once existed in Plot. This is done to avoid having to change all bins when points in the beginning are removed. The offset _pointInBinOffset is a positive number that denotes the difference between the index of the point in the current point arraylist and the virtual one containing all points.
    - _pointsPersistence
```
int _pointsPersistence
```
      Number of points to persist for.
    - _prevxpos
```
java.util.ArrayList<E> _prevxpos
```
      Information about the previously plotted point.
    - _prevypos
```
java.util.ArrayList<E> _prevypos
```
      Information about the previously plotted point.
    - _prevErasedxpos
```
java.util.ArrayList<E> _prevErasedxpos
```
      Information about the previously erased point.
    - _prevErasedypos
```
java.util.ArrayList<E> _prevErasedypos
```
      Information about the previously erased point.
    - _radius
```
int _radius
```
      Give the radius of a point for efficiency.
    - _reuseDatasets
```
boolean _reuseDatasets
```
      True if we saw 'reusedatasets: on' in the file.
    - _sawFirstDataSet
```
boolean _sawFirstDataSet
```
      Have we seen a DataSet line in the current data file?
    - _scheduledBinsToAdd
```
java.util.ArrayList<E> _scheduledBinsToAdd
```
    - _scheduledBinsToErase
```
java.util.ArrayList<E> _scheduledBinsToErase
```
    - _showing
```
boolean _showing
```
      Set by _drawPlot(), and reset by clear().
    - _xPersistence
```
double _xPersistence
```
      Persistence in units of the horizontal axis.
    - _xyInvalid
```
boolean _xyInvalid
```
      Flag indicating validity of _xBottom, _xTop, _yBottom, and _yTop.
    - _width
```
float _width
```
      The width of the current stroke. Only effective if the Graphics is a Graphics2D.
- Class ptolemy.plot.PlotApplet extends javax.swing.JApplet implements Serializable
- Class ptolemy.plot.PlotApplication extends PlotFrame implements Serializable
- Class ptolemy.plot.PlotBox extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _padding
```
double _padding
```
      The factor we pad by so that we don't plot points on the axes.
    - _xlowgiven
```
double _xlowgiven
```
      The given X and Y ranges. If they have been given the top and bottom of the x and y ranges. This is different from _xMin and _xMax, which actually represent the range of data that is plotted. This represents the range specified (which may be different due to zooming).
    - _xhighgiven
```
double _xhighgiven
```
      The given X and Y ranges. If they have been given the top and bottom of the x and y ranges. This is different from _xMin and _xMax, which actually represent the range of data that is plotted. This represents the range specified (which may be different due to zooming).
    - _ylowgiven
```
double _ylowgiven
```
      The given X and Y ranges. If they have been given the top and bottom of the x and y ranges. This is different from _xMin and _xMax, which actually represent the range of data that is plotted. This represents the range specified (which may be different due to zooming).
    - _yhighgiven
```
double _yhighgiven
```
      The given X and Y ranges. If they have been given the top and bottom of the x and y ranges. This is different from _xMin and _xMax, which actually represent the range of data that is plotted. This represents the range specified (which may be different due to zooming).
    - _xBottom
```
double _xBottom
```
      The minimum X value registered so for, for auto ranging.
    - _xTop
```
double _xTop
```
      The maximum X value registered so for, for auto ranging.
    - _yBottom
```
double _yBottom
```
      The minimum Y value registered so for, for auto ranging.
    - _yTop
```
double _yTop
```
      The maximum Y value registered so for, for auto ranging.
    - _xlog
```
boolean _xlog
```
      Whether to draw the axes using a logarithmic scale.
    - _ylog
```
boolean _ylog
```
      Whether to draw the axes using a logarithmic scale.
    - _grid
```
boolean _grid
```
      Whether to draw a background grid.
    - _wrap
```
boolean _wrap
```
      Whether to wrap the X axis.
    - _wrapHigh
```
double _wrapHigh
```
      The high range of the X axis for wrapping.
    - _wrapLow
```
double _wrapLow
```
      The low range of the X axis for wrapping.
    - _background
```
java.awt.Color _background
```
      Color of the background, settable from HTML.
    - _foreground
```
java.awt.Color _foreground
```
      Color of the foreground, settable from HTML.
    - _topPadding
```
int _topPadding
```
      Top padding. Derived classes can increment these to make space around the plot.
    - _bottomPadding
```
int _bottomPadding
```
      Bottom padding. Derived classes can increment these to make space around the plot.
    - _rightPadding
```
int _rightPadding
```
      Right padding. Derived classes can increment these to make space around the plot.
    - _leftPadding
```
int _leftPadding
```
      Left padding. Derived classes can increment these to make space around the plot.
    - _ulx
```
int _ulx
```
      The x value of the upper left corner of the plot rectangle in pixels. Given a mouse click at x0, to convert to data coordinates, use: (_xMin + (x0 - _ulx) / _xscale).
    - _uly
```
int _uly
```
      The y value of the upper left corner of the plot rectangle in pixels. Given a mouse click at y0, to convert to data coordinates, use: (_yMax - (y0 - _uly) / _yscale).
    - _lrx
```
int _lrx
```
      The x value of the lower right corner of the plot rectangle in pixels.
    - _lry
```
int _lry
```
      The y value of the lower right corner of the plot rectangle in pixels.
    - _specifiedPlotRectangle
```
java.awt.Rectangle _specifiedPlotRectangle
```
      User specified plot rectangle, null if none specified.
      
      See Also:
      
      PlotBox.setPlotRectangle(Rectangle)
    - _yscale
```
double _yscale
```
      Scaling used for the vertical axis in plotting points. The units are pixels/unit, where unit is the units of the Y axis.
    - _xscale
```
double _xscale
```
      Scaling used for the horizontal axis in plotting points. The units are pixels/unit, where unit is the units of the X axis.
    - _usecolor
```
boolean _usecolor
```
      Indicator whether to use _colors.
    - _width
```
int _width
```
      Width and height of component in pixels.
    - _height
```
int _height
```
      Width and height of component in pixels.
    - _preferredWidth
```
int _preferredWidth
```
      Width and height of component in pixels.
    - _preferredHeight
```
int _preferredHeight
```
      Width and height of component in pixels.
    - _documentBase
```
java.net.URL _documentBase
```
      The document base we use to find the _filespec. NOTE: Use of this variable is deprecated. But it is made available to derived classes for backward compatibility. FIXME: Sun's appletviewer gives an exception if this is protected. Why?? So we make it temporarily public.
    - _actionsDeferred
```
boolean _actionsDeferred
```
      Indicator of whether actions are deferred.
    - _automaticRescale
```
boolean _automaticRescale
```
    - _deferredActions
```
java.util.LinkedList<E> _deferredActions
```
      List of deferred actions.
    - _filespec
```
java.lang.String _filespec
```
      The file to be opened.
    - _ytickMax
```
double _ytickMax
```
      The range of the plot as labeled (multiply by 10^exp for actual range.
    - _ytickMin
```
double _ytickMin
```
      The range of the plot as labeled (multiply by 10^exp for actual range.
    - _xtickMax
```
double _xtickMax
```
      The range of the plot as labeled (multiply by 10^exp for actual range.
    - _xtickMin
```
double _xtickMin
```
      The range of the plot as labeled (multiply by 10^exp for actual range.
    - _yExp
```
int _yExp
```
      The power of ten by which the range numbers should be multiplied.
    - _xExp
```
int _xExp
```
      The power of ten by which the range numbers should be multiplied.
    - _ytickscale
```
double _ytickscale
```
      Scaling used in making tick marks.
    - _xtickscale
```
double _xtickscale
```
      Scaling used in making tick marks.
    - _captionFont
```
java.awt.Font _captionFont
```
      Caption font information.
    - _labelFont
```
java.awt.Font _labelFont
```
      Font information.
    - _superscriptFont
```
java.awt.Font _superscriptFont
```
      Font information.
    - _titleFont
```
java.awt.Font _titleFont
```
      Font information.
    - _captionFontMetrics
```
java.awt.FontMetrics _captionFontMetrics
```
      Caption font metric information.
    - _labelFontMetrics
```
java.awt.FontMetrics _labelFontMetrics
```
      FontMetric information.
    - _superscriptFontMetrics
```
java.awt.FontMetrics _superscriptFontMetrics
```
      FontMetric information.
    - _titleFontMetrics
```
java.awt.FontMetrics _titleFontMetrics
```
      FontMetric information.
    - _xlabel
```
java.lang.String _xlabel
```
      The title and label strings.
    - _ylabel
```
java.lang.String _ylabel
```
      The title and label strings.
    - _title
```
java.lang.String _title
```
      The title and label strings.
    - _captionStrings
```
java.util.Vector<E> _captionStrings
```
      Caption information.
    - _legendStrings
```
java.util.Vector<E> _legendStrings
```
      Legend information.
    - _legendDatasets
```
java.util.Vector<E> _legendDatasets
```
      Legend information.
    - _xticks
```
java.util.Vector<E> _xticks
```
      If XTicks or YTicks are given/
    - _xticklabels
```
java.util.Vector<E> _xticklabels
```
      If XTicks or YTicks are given/
    - _yticks
```
java.util.Vector<E> _yticks
```
      If XTicks or YTicks are given/
    - _yticklabels
```
java.util.Vector<E> _yticklabels
```
      If XTicks or YTicks are given/
    - _originalXRangeGiven
```
boolean _originalXRangeGiven
```
    - _originalYRangeGiven
```
boolean _originalYRangeGiven
```
    - _originalXlow
```
double _originalXlow
```
    - _originalXhigh
```
double _originalXhigh
```
    - _originalYlow
```
double _originalYlow
```
    - _originalYhigh
```
double _originalYhigh
```
    - _timedRepaint
```
boolean _timedRepaint
```
- Class ptolemy.plot.PlotFormatter extends javax.swing.JPanel implements Serializable
  - Serialized Fields
    - _plot
```
PlotBox _plot
```
      The plot object controlled by this formatter.
    - _wideQuery
```
Query _wideQuery
```
    - _narrowQuery
```
Query _narrowQuery
```
    - _originalTitle
```
java.lang.String _originalTitle
```
    - _originalCaptions
```
java.util.Vector<E> _originalCaptions
```
    - _originalXLabel
```
java.lang.String _originalXLabel
```
    - _originalYLabel
```
java.lang.String _originalYLabel
```
    - _originalMarks
```
java.lang.String _originalMarks
```
    - _originalXTicksSpec
```
java.lang.String _originalXTicksSpec
```
    - _originalYTicksSpec
```
java.lang.String _originalYTicksSpec
```
    - _originalXRange
```
double[] _originalXRange
```
    - _originalYRange
```
double[] _originalYRange
```
    - _originalXTicks
```
java.util.Vector<E>[] _originalXTicks
```
    - _originalYTicks
```
java.util.Vector<E>[] _originalYTicks
```
    - _originalGrid
```
boolean _originalGrid
```
    - _originalLineStyles
```
boolean _originalLineStyles
```
    - _originalStems
```
boolean _originalStems
```
    - _originalColor
```
boolean _originalColor
```
    - _originalConnected
```
boolean[][] _originalConnected
```
    - _originalPoints
```
PlotPoint[][] _originalPoints
```
- Class ptolemy.plot.PlotFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - plot
```
PlotBox plot
```
      The plot object held by this frame.
    - _directory
```
java.io.File _directory
```
      Directory that contains the input file.
    - _editMenu
```
javax.swing.JMenu _editMenu
```
      Edit menu for this frame.
    - _file
```
java.io.File _file
```
      The input file.
    - _fileMenu
```
javax.swing.JMenu _fileMenu
```
      File menu for this frame.
    - _menubar
```
javax.swing.JMenuBar _menubar
```
      Menubar for this frame.
    - _specialMenu
```
javax.swing.JMenu _specialMenu
```
      Special menu for this frame.
- Class ptolemy.plot.PlotLive extends Plot implements Serializable
  - Serialized Fields
    - _plotLiveThread
```
java.lang.Thread _plotLiveThread
```
      Thread of this plotter
    - _plotting
```
boolean _plotting
```
      True if we are actually plotting.
    - _paused
```
boolean _paused
```
      True if we are paused.
    - _startButton
```
javax.swing.JButton _startButton
```
      Start and Stop Buttons.
    - _stopButton
```
javax.swing.JButton _stopButton
```
      Start and Stop Buttons.
- Class ptolemy.plot.PlotLiveApplet extends PlotApplet implements Serializable
- Class ptolemy.plot.PlotPoint extends java.lang.Object implements Serializable
  - Serialized Fields
    - connected
```
boolean connected
```
      True if this point is connected to the previous point by a line.
    - errorBar
```
boolean errorBar
```
      True if the yLowEB and yHighEB fields are valid.
    - originalx
```
double originalx
```
      Original value of x before wrapping.
    - x
```
double x
```
      X value after wrapping (if any).
    - y
```
double y
```
      Y value.
    - derivatives
```
double[] derivatives
```
      d^n y/dx^n for n > 0.
    - yLowEB
```
double yLowEB
```
      Error bar Y low value.
    - yHighEB
```
double yHighEB
```
      Error bar Y low value.
Package ptolemy.plot.compat
- Class ptolemy.plot.compat.PxgraphApplet extends PlotApplet implements Serializable
  - Serialized Fields
    - _parser
```
PxgraphParser _parser
```
- Class ptolemy.plot.compat.PxgraphApplication extends PlotApplication implements Serializable
  - Serialized Fields
    - _parser
```
PxgraphParser _parser
```
Package ptolemy.plot.demo
- Class ptolemy.plot.demo.HistogramDemo extends HistogramApplet implements Serializable
- Class ptolemy.plot.demo.PlotDemo extends PlotApplet implements Serializable
- Class ptolemy.plot.demo.PlotFourierSeries extends PlotApplet implements Serializable
- Class ptolemy.plot.demo.PlotLiveDemo extends PlotLive implements Serializable
  - Serialized Fields
    - _count
```
double _count
```
      Value being plotted
- Class ptolemy.plot.demo.PlotLiveDemoApplet extends PlotLiveApplet implements Serializable
- Class ptolemy.plot.demo.TwoPlotExample extends javax.swing.JFrame implements Serializable
Package ptolemy.plot.plotml
- Class ptolemy.plot.plotml.EditablePlotMLApplet extends PlotMLApplet implements Serializable
  - Serialized Fields
    - _choice
```
javax.swing.JComboBox<E> _choice
```
- Class ptolemy.plot.plotml.EditablePlotMLApplication extends PlotMLApplication implements Serializable
- Class ptolemy.plot.plotml.HistogramMLApplet extends PlotMLApplet implements Serializable
- Class ptolemy.plot.plotml.HistogramMLApplication extends PlotMLApplication implements Serializable
- Class ptolemy.plot.plotml.PlotMLApplet extends PlotApplet implements Serializable
- Class ptolemy.plot.plotml.PlotMLApplication extends PlotApplication implements Serializable
- Class ptolemy.plot.plotml.PlotMLFrame extends PlotFrame implements Serializable
Package ptolemy.util
- Class ptolemy.util.CancelException extends java.lang.Exception implements Serializable
Package ptolemy.vergil
- Class ptolemy.vergil.MoMLViewerApplet extends MoMLApplet implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
      The configuration that is read from the configuration applet param.
- Class ptolemy.vergil.TypeAnimatorApplet extends MoMLViewerApplet implements Serializable
- Class ptolemy.vergil.VergilApplet extends BasicJApplet implements Serializable
Package ptolemy.vergil.actor
- Class ptolemy.vergil.actor.ActorController.ListenToActorAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
    - _controller
```
BasicGraphController _controller
```
    - _target
```
NamedObj _target
```
    - _tableauFrame
```
TableauFrame _tableauFrame
```
- Class ptolemy.vergil.actor.ActorEditorGraphController.NewRelationAction extends FigureAction implements Serializable
- Class ptolemy.vergil.actor.ActorGraphFrame extends ExtendedGraphFrame implements Serializable
  - Serialized Fields
    - _controller
```
ActorEditorGraphController _controller
```
      The graph controller. This is created in _createGraphPane().
    - _debugMenu
```
javax.swing.JMenu _debugMenu
```
      Debug menu for this frame.
    - _createHierarchyAction
```
javax.swing.Action _createHierarchyAction
```
      The action for creating a level of hierarchy.
    - _exportDesignPatternAction
```
javax.swing.Action _exportDesignPatternAction
```
      The action for exporting a design pattern.
    - _saveInLibraryAction
```
javax.swing.Action _saveInLibraryAction
```
      The action for saving the current model in a library.
    - _importDesignPatternAction
```
javax.swing.Action _importDesignPatternAction
```
      The action for importing a design pattern.
    - _importLibraryAction
```
javax.swing.Action _importLibraryAction
```
      The action for importing a library of components.
    - _instantiateAttributeAction
```
javax.swing.Action _instantiateAttributeAction
```
      The action for instantiating an attribute.
    - _instantiateEntityAction
```
javax.swing.Action _instantiateEntityAction
```
      The action for instantiating an entity.
    - _instantiatePortAction
```
javax.swing.Action _instantiatePortAction
```
      The action for instantiating a port.
    - _debugMenuListener
```
ActorGraphFrame.DebugMenuListener _debugMenuListener
```
      Listener for debug menu commands.
- Class ptolemy.vergil.actor.ActorGraphFrame.InstantiateAttributeAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _graphFrame
```
ExtendedGraphFrame _graphFrame
```
      The graph frame that contains this action.
    - _lastAttributeClassName
```
java.lang.String _lastAttributeClassName
```
      The most recent class name for instantiating an attribute.
- Class ptolemy.vergil.actor.ActorGraphFrame.InstantiateEntityAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _graphFrame
```
ExtendedGraphFrame _graphFrame
```
      The graph frame that contains this action.
    - _lastEntityClassName
```
java.lang.String _lastEntityClassName
```
      The most recent class name for instantiating an entity.
    - _lastLocation
```
java.lang.String _lastLocation
```
      The most recent location for instantiating a class.
- Class ptolemy.vergil.actor.DocBuilderGUI extends PtolemyFrame implements Serializable
  - Serialized Fields
    - _applicationName
```
java.lang.String _applicationName
```
      The name of the application, usually from the _applicationName StringAttribute in configuration.xml. If null, then use the default documentation in doc/codeDoc.
- Class ptolemy.vergil.actor.DocViewer extends HTMLViewer implements Serializable
  - Serialized Fields
    - _applicationName
```
java.lang.String _applicationName
```
      The name of the application, usually from the _applicationName StringAttribute in configuration.xml. If the value is the empty string, then use the default documentation in doc/codeDoc.
    - _configuration
```
Configuration _configuration
```
      The configuration specified in the constructor.
    - _font
```
java.awt.Font _font
```
      The font to use for No icon available message.
    - _graphPane
```
diva.graph.GraphPane _graphPane
```
      The graph pane.
    - _iconContainer
```
CompositeEntity _iconContainer
```
      The composite entity containing the icon.
    - _jgraph
```
diva.graph.JGraph _jgraph
```
      The jgraph.
    - _target
```
NamedObj _target
```
      The target given in the constructor, if any.
Package ptolemy.vergil.basic
- Class ptolemy.vergil.basic.BasicGraphController.OpenBaseClassAction extends FigureAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphController.UnitSolverDialogAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame extends PtolemyFrame implements Serializable
  - Serialized Fields
    - _copyAction
```
javax.swing.Action _copyAction
```
      The copy action.
    - _cutAction
```
javax.swing.Action _cutAction
```
      The cut action.
    - _defaultLibrary
```
LibraryAttribute _defaultLibrary
```
      The default Library.
    - _dropTarget
```
EditorDropTarget _dropTarget
```
      The instance of EditorDropTarget associated with the JGraph.
    - _editMenu
```
javax.swing.JMenu _editMenu
```
      The edit menu.
    - _editPreferencesAction
```
BasicGraphFrame.EditPreferencesAction _editPreferencesAction
```
      The action to edit preferences.
    - _exportGIFAction
```
javax.swing.Action _exportGIFAction
```
      The export to GIF action.
    - _exportHTMLAction
```
javax.swing.Action _exportHTMLAction
```
      The export HTML action.
    - _exportPDFAction
```
javax.swing.Action _exportPDFAction
```
      The export to PDF action.
    - _exportPNGAction
```
javax.swing.Action _exportPNGAction
```
      The export to PNG action.
    - _findAction
```
javax.swing.Action _findAction
```
      The find action.
    - _graphMenu
```
javax.swing.JMenu _graphMenu
```
      The graph menu.
    - _graphPanner
```
diva.gui.toolbox.JCanvasPanner _graphPanner
```
      The panner. Note that this variable can be null if the configuration does not have an entity named "actor library". For example, see $PTII/bin/vergil -ptinyViewer.
    - _jgraph
```
diva.graph.JGraph _jgraph
```
      The instance of JGraph for this editor.
    - _layoutAction
```
javax.swing.Action _layoutAction
```
      The action for automatically laying out the graph. This can be either an advanced layout or the simple Ptolemy layout, depending on whether the better one is available.
    - _layoutConfigDialogAction
```
javax.swing.Action _layoutConfigDialogAction
```
      The action for opening the layout configuration dialog. This reference can be null, since the dialog is only supported if advanced layout is available. In this case the action should not be shown in menus.
    - _library
```
javax.swing.JTree _library
```
      The library display widget.
    - _libraryContextMenuCreator
```
PTreeMenuCreator _libraryContextMenuCreator
```
      The library context menu creator.
    - _libraryModel
```
EntityTreeModel _libraryModel
```
      The library model.
    - _libraryScrollPane
```
javax.swing.JScrollPane _libraryScrollPane
```
      The library scroll pane.
    - _moveToBackAction
```
BasicGraphFrame.MoveToBackAction _moveToBackAction
```
      Action to move to the back.
    - _moveToFrontAction
```
BasicGraphFrame.MoveToFrontAction _moveToFrontAction
```
      Action to move to the front.
    - _palettePane
```
javax.swing.JPanel _palettePane
```
      The library display panel.
    - _pasteAction
```
javax.swing.Action _pasteAction
```
      The paste action.
    - _reloadAccessorsAction
```
javax.swing.Action _reloadAccessorsAction
```
      The action for reloading accessors.
    - _rightComponent
```
javax.swing.JComponent _rightComponent
```
      The right component for this editor.
    - _splitPane
```
javax.swing.JSplitPane _splitPane
```
      The split pane for library and editor. Note that this variable can be null if the configuration does not have an entity named "actor library". For example, see $PTII/bin/vergil -ptinyViewer.
    - _toolbar
```
javax.swing.JToolBar _toolbar
```
      The toolbar.
    - _topLibrary
```
CompositeEntity _topLibrary
```
      The library.
    - _treeView
```
PTree _treeView
```
      The tree view of the model, used for browsing large models.
    - _treeViewScrollPane
```
javax.swing.JScrollPane _treeViewScrollPane
```
      The tree view scroll pane.
    - _treeViewModel
```
ClassAndEntityTreeModel _treeViewModel
```
      The tree view model.
    - _zoomFitAction
```
javax.swing.Action _zoomFitAction
```
      Action for zoom fitting.
    - _zoomInAction
```
javax.swing.Action _zoomInAction
```
      Action for zooming in.
    - _zoomOutAction
```
javax.swing.Action _zoomOutAction
```
      Action for zooming out.
    - _zoomResetAction
```
javax.swing.Action _zoomResetAction
```
      Action for zoom reset.
    - _zoomFlag
```
boolean _zoomFlag
```
      True if we are inside zoom(). Used by derived classes with scrollbars.
    - _findInLibraryEntryBox
```
javax.swing.JTextField _findInLibraryEntryBox
```
      The entry box for find in library.
    - _mousePressedLayerAdapter
```
BasicGraphFrame.MousePressedLayerAdapter _mousePressedLayerAdapter
```
      A layer adapter to handle the mousePressed event.
    - _openContainerAction
```
javax.swing.Action _openContainerAction
```
      Action for opening the container, moving uplevel.
    - _previousMouseX
```
int _previousMouseX
```
      X coordinate of where we last processed a press or drag of the middle mouse button.
    - _previousMouseY
```
int _previousMouseY
```
      Y coordinate of where we last processed a press or drag of the middle mouse button.
    - _printAction
```
javax.swing.Action _printAction
```
      Action to print the model.
    - _redoAction
```
javax.swing.Action _redoAction
```
      Action to redo the last undone MoML change.
    - _saveAction
```
javax.swing.Action _saveAction
```
      Action to save the model.
    - _undoAction
```
javax.swing.Action _undoAction
```
      Action to undo the last MoML change.
- Class ptolemy.vergil.basic.BasicGraphFrame.CopyAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.CutAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.EditPreferencesAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.ExportImageAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _formatName
```
java.lang.String _formatName
```
- Class ptolemy.vergil.basic.BasicGraphFrame.FindAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.MoveToBackAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.MoveToFrontAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrame.PasteAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.BasicGraphFrameExtension extends java.lang.Object implements Serializable
- Class ptolemy.vergil.basic.CustomizeDocumentationAction extends FigureAction implements Serializable
- Class ptolemy.vergil.basic.DependencyResultsDialog extends SearchResultsDialog implements Serializable
- Class ptolemy.vergil.basic.EditorDropTarget extends java.awt.dnd.DropTarget implements Serializable
  - Serialized Fields
    - _additionalListeners
```
java.util.Vector<E> _additionalListeners
```
      Vector to contain additional listeners.
    - _dropIntoEnabled
```
boolean _dropIntoEnabled
```
      Flag indicating whether drop into is enabled.
- Class ptolemy.vergil.basic.ExtendedGraphFrame extends BasicGraphFrame implements Serializable
  - Serialized Fields
    - _fullScreenAction
```
javax.swing.Action _fullScreenAction
```
      Action for displaying in full-screen mode.
    - _previousDefaultContext
```
java.awt.Component _previousDefaultContext
```
      Default context for dialogs before going to full-screen mode.
    - _screen
```
javax.swing.JDialog _screen
```
      If we are in full-screen mode, this will be non-null.
- Class ptolemy.vergil.basic.ExtendedGraphFrame.FullScreenAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.basic.GetDocumentationAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
      The configuration.
    - _docPreference
```
int _docPreference
```
      Defines a preference for whether to display kepler documentation or ptolemy documentation. This can be set in the constructor and it default to ptolemy. 0 is ptolemy, 1 is kepler.
    - _effigy
```
Effigy _effigy
```
      Defines the effigy to use if the effigy is not apparent from the model
- Class ptolemy.vergil.basic.LookInsideAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
      The configuration for the controller that contains this LookInsideAction.
- Class ptolemy.vergil.basic.RemoveCustomDocumentationAction extends FigureAction implements Serializable
- Class ptolemy.vergil.basic.SearchResultsDialog extends PtolemyDialog implements Serializable
  - Serialized Fields
    - _owner
```
java.awt.Frame _owner
```
      The The frame that, per the user, is generating the dialog. Typically a BasicGraphFrame.
    - _resultsTableModel
```
ptolemy.vergil.basic.SearchResultsDialog.ResultsTableModel _resultsTableModel
```
      Model for the table.
    - _query
```
Query _query
```
      The query portion of the dialog.
    - _resultsTable
```
javax.swing.JTable _resultsTable
```
      Table for search results.
    - _target
```
Entity<T extends Port> _target
```
      The entity on which search is performed.
    - _highlights
```
java.util.Set<E> _highlights
```
      Highlights that have been created.
    - _previousSearchTerm
```
java.lang.String _previousSearchTerm
```
      Previous search term, if any.
    - _results
```
NamedObj[] _results
```
      The results of the latest search.
    - _searchButton
```
javax.swing.JButton _searchButton
```
      The Search button.
- Class ptolemy.vergil.basic.WithIconGraphController.NewPortAction extends FigureAction implements Serializable
  - Serialized Fields
    - _prototype
```
IOPort _prototype
```
Package ptolemy.vergil.basic.export.html
- Class ptolemy.vergil.basic.export.html.ExportHTMLAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _basicGraphFrame
```
BasicGraphFrame _basicGraphFrame
```
      The associated Vergil frame.
    - _areaAttributes
```
java.util.HashMap<K,V> _areaAttributes
```
      Data structure storing area attributes to for each Ptolemy II object.
    - _contents
```
java.util.HashMap<K,V> _contents
```
      Content added by position.
    - _end
```
java.util.LinkedList<E> _end
```
      Content of the end section.
    - _head
```
java.util.LinkedList<E> _head
```
      Content of the head section.
    - _parameters
```
ExportParameters _parameters
```
      The parameters of the current export, if there is one.
    - _showTitleInHTML
```
boolean _showTitleInHTML
```
      Indicator of whether title should be shown in HTML.
    - _start
```
java.util.LinkedList<E> _start
```
      Content of the start section.
    - _sanitizedModelName
```
java.lang.String _sanitizedModelName
```
      The sanitized modelName
    - _title
```
java.lang.String _title
```
      The title of the page.
Package ptolemy.vergil.debugger
- Class ptolemy.vergil.debugger.BreakpointConfigurer extends Query implements Serializable
  - Serialized Fields
    - _actor
```
Actor _actor
```
    - _actorProfile
```
DebugProfile _actorProfile
```
    - _graphController
```
BasicGraphController _graphController
```
- Class ptolemy.vergil.debugger.BreakpointConfigurerDialog extends ComponentDialog implements Serializable
Package ptolemy.vergil.icon
- Class ptolemy.vergil.icon.EditIconFrame extends BasicGraphFrame implements Serializable
  - Serialized Fields
    - _controller
```
EditIconGraphController _controller
```
    - _ZOOM_SCALE
```
double _ZOOM_SCALE
```
Package ptolemy.vergil.kernel
- Class ptolemy.vergil.kernel.ListenToAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
    - _controller
```
BasicGraphController _controller
```
    - _target
```
NamedObj _target
```
- Class ptolemy.vergil.kernel.PortDialogAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
- Class ptolemy.vergil.kernel.RenameDialogAction extends FigureAction implements Serializable
Package ptolemy.vergil.modal
- Class ptolemy.vergil.modal.CaseGraphFrame extends ActorGraphFrame implements Serializable
  - Serialized Fields
    - _caseMenu
```
javax.swing.JMenu _caseMenu
```
      The case menu.
    - _addCaseAction
```
CaseGraphFrame.AddCaseAction _addCaseAction
```
      The action to add a case.
    - _case
```
Case _case
```
      The Case actor displayed by this frame.
    - _removeCaseAction
```
CaseGraphFrame.RemoveCaseAction _removeCaseAction
```
      The action to remove a case.
    - _tabbedPane
```
javax.swing.JTabbedPane _tabbedPane
```
      The tabbed pane for cases.
- Class ptolemy.vergil.modal.CaseGraphFrame.AddCaseAction extends FigureAction implements Serializable
- Class ptolemy.vergil.modal.CaseGraphFrame.RemoveCaseAction extends FigureAction implements Serializable
- Class ptolemy.vergil.modal.FSMGraphController.NewStateAction extends FigureAction implements Serializable
- Class ptolemy.vergil.modal.FSMGraphFrame extends ExtendedGraphFrame implements Serializable
  - Serialized Fields
    - _controller
```
FSMGraphController _controller
```
      The controller. The controller is protected so that the subclass (InterfaceAutomatonGraphFrame) can set it to a more specific controller.
    - _debugMenu
```
javax.swing.JMenu _debugMenu
```
      Debug menu for this frame.
    - _lastDelayTime
```
long _lastDelayTime
```
    - _modifiedPorts
```
java.util.List<E> _modifiedPorts
```
- Class ptolemy.vergil.modal.StateController.LookInsideAction extends FigureAction implements Serializable
Package ptolemy.vergil.modal.ia
- Class ptolemy.vergil.modal.ia.InterfaceAutomatonGraphController.ComposeWithAction extends javax.swing.AbstractAction implements Serializable
- Class ptolemy.vergil.modal.ia.InterfaceAutomatonGraphFrame extends FSMGraphFrame implements Serializable
Package ptolemy.vergil.modal.modal
- Class ptolemy.vergil.modal.modal.HierarchicalStateController.AddRefinementAction extends FigureAction implements Serializable
- Class ptolemy.vergil.modal.modal.HierarchicalStateController.RemoveRefinementAction extends FigureAction implements Serializable
Package ptolemy.vergil.toolbox
- Class ptolemy.vergil.toolbox.AnnotationEditorFactory.AnnotationTextEditor extends javax.swing.JPanel implements Serializable
- Class ptolemy.vergil.toolbox.ConfigureAction extends FigureAction implements Serializable
- Class ptolemy.vergil.toolbox.EditIconAction extends FigureAction implements Serializable
  - Serialized Fields
    - _configuration
```
Configuration _configuration
```
- Class ptolemy.vergil.toolbox.FigureAction extends javax.swing.AbstractAction implements Serializable
  - Serialized Fields
    - _figure
```
diva.canvas.Figure _figure
```
    - _frame
```
java.lang.ref.WeakReference<T> _frame
```
    - _sourceType
```
FigureAction.SourceType _sourceType
```
    - _target
```
NamedObj _target
```
    - _x
```
int _x
```
    - _y
```
int _y
```
- Class ptolemy.vergil.toolbox.MoveAction extends FigureAction implements Serializable
  - Serialized Fields
    - _type
```
ptolemy.vergil.toolbox.MoveAction.MoveType _type
```
      The type of move.
- Class ptolemy.vergil.toolbox.PtolemyListCellRenderer extends javax.swing.DefaultListCellRenderer implements Serializable
- Class ptolemy.vergil.toolbox.PtolemyTransferable extends java.lang.Object implements Serializable
  - Serialized Fields
    - _flavors
```
java.awt.datatransfer.DataFlavor[] _flavors
```
    - _objectList
```
java.util.List<E> _objectList
```
- Class ptolemy.vergil.toolbox.RemoveIconAction extends FigureAction implements Serializable
- Class ptolemy.vergil.toolbox.RotateOrFlipPorts extends FigureAction implements Serializable
  - Serialized Fields
    - _direction
```
int _direction
```
      The direction requested in the constructor.
- Class ptolemy.vergil.toolbox.TextEditorForStringAttributes extends TextEditor implements Serializable
  - Serialized Fields
    - _factory
```
TextEditorFactory _factory
```
    - _attributeToEdit
```
Attribute _attributeToEdit
```
    - _modelModified
```
boolean _modelModified
```
      True if this attribute was modified and saved, which caused. the containing model to be modified.
Package ptolemy.vergil.tree
- Class ptolemy.vergil.tree.PtolemyTreeCellRenderer extends javax.swing.tree.DefaultTreeCellRenderer implements Serializable
  - Serialized Fields
    - _showSettableValues
```
boolean _showSettableValues
```
      Indicator of whether to show expression values of Settables.
- Class ptolemy.vergil.tree.PTree extends javax.swing.JTree implements Serializable
- Class ptolemy.vergil.tree.TreeEditor extends javax.swing.JFrame implements Serializable
- Class ptolemy.vergil.tree.TreeEditorPanel extends javax.swing.JScrollPane implements Serializable
  - Serialized Fields
    - _parser
```
MoMLParser _parser
```
      The parser being used for this model.
    - _toplevel
```
NamedObj _toplevel
```
      The top-level entity of the model.
- Class ptolemy.vergil.tree.TreeTableau.TreeFrame extends PtolemyFrame implements Serializable

Package ptolemy.vergil.unit

Class ptolemy.vergil.unit.ConfigureUnitsAction extends FigureAction implements Serializable
- Serialized Fields
  - _configuration
```
Configuration _configuration
```

Class ptolemy.vergil.unit.UnitConstraintsDialog extends PtolemyDialog implements Serializable

Serialized Fields

_addButton
```
javax.swing.JButton _addButton
```
_applyButton
```
javax.swing.JButton _applyButton
```
_commitButton
```
javax.swing.JButton _commitButton
```
_removeButton
```
javax.swing.JButton _removeButton
```

_rowSelectionListener

javax.swing.event.ListSelectionListener _rowSelectionListener

_unitsTable
```
javax.swing.JTable _unitsTable
```

_unitsTableModel

ptolemy.vergil.unit.UnitConstraintsDialog.UnitsTableModel _unitsTableModel

Class ptolemy.vergil.unit.UnitSolverDialog extends PtolemyDialog implements Serializable

Serialized Fields

_controller
```
diva.graph.GraphController _controller
```

_defaultSelectionRenderer

diva.canvas.interactor.SelectionRenderer _defaultSelectionRenderer

_entities
```
java.util.Set<E> _entities
```
_fullSolutionResult
```
javax.swing.JLabel _fullSolutionResult
```

_setToSelectedButton

javax.swing.JButton _setToSelectedButton

_showComponentsButton

javax.swing.JButton _showComponentsButton

_model
```
TypedCompositeActor _model
```

_selectionModel

diva.canvas.interactor.SelectionModel _selectionModel

_graphModel
```
AbstractBasicGraphModel _graphModel
```
_relations
```
java.util.Set<E> _relations
```

_selectionInteractor

diva.canvas.interactor.SelectionInteractor _selectionInteractor

_solutions
```
java.util.Vector<E> _solutions
```
_solutionsList
```
javax.swing.JList<E> _solutionsList
```

_solutionsListModel

UnitSolverDialog.SolutionListModel _solutionsListModel

_runMinimalSpanSolverButton

javax.swing.JButton _runMinimalSpanSolverButton

_runFullSolverButton

javax.swing.JButton _runFullSolverButton

_tableau
```
Tableau _tableau
```
_uConstraints
```
UnitConstraints _uConstraints
```

Class ptolemy.vergil.unit.UnitSolverDialog.SolutionListModel extends javax.swing.AbstractListModel implements Serializable
- Serialized Fields
  - _solutions
```
java.util.Vector<E> _solutions
```

Serialized Form

Package com.jgoodies.forms.debug

Class com.jgoodies.forms.debug.FormDebugPanel extends javax.swing.JPanel implements Serializable

Serialized Fields

paintInBackground

paintDiagonals

gridColor

Package com.jgoodies.forms.layout

Class com.jgoodies.forms.layout.CellConstraints extends java.lang.Object implements Serializable

Serialized Fields

gridX

gridY

gridWidth

gridHeight

hAlign

vAlign

insets

Class com.jgoodies.forms.layout.CellConstraints.Alignment extends java.lang.Object implements Serializable

Serialization Methods

readResolve

Serialized Fields

ordinal

Class com.jgoodies.forms.layout.ColumnSpec extends FormSpec implements Serializable

Class com.jgoodies.forms.layout.ConstantSize extends java.lang.Object implements Serializable

Serialized Fields

value

unit

Class com.jgoodies.forms.layout.ConstantSize.Unit extends java.lang.Object implements Serializable

Serialization Methods

readResolve

Serialized Fields

ordinal

Class com.jgoodies.forms.layout.FormLayout extends java.lang.Object implements Serializable

Serialization Methods

writeObject

Serialized Fields

colSpecs

rowSpecs

colGroupIndices

rowGroupIndices

constraintMap

componentSizeCache

minimumWidthMeasure

minimumHeightMeasure

preferredWidthMeasure

preferredHeightMeasure

Class com.jgoodies.forms.layout.FormSpec extends java.lang.Object implements Serializable

Serialized Fields

defaultAlignment

size

resizeWeight

Class com.jgoodies.forms.layout.FormSpec.DefaultAlignment extends java.lang.Object implements Serializable

Serialization Methods

readResolve

Serialized Fields

ordinal

Class com.jgoodies.forms.layout.RowSpec extends FormSpec implements Serializable

Package com.microstar.xml

Class com.microstar.xml.XmlException extends java.lang.Exception implements Serializable

Serialized Fields

_message

_cause

_systemId

_line

_column

Package com.microstar.xml.demo

Class com.microstar.xml.demo.XmlApplet extends java.applet.Applet implements Serializable

Serialized Fields

isApplet

parser

textArea

buttonPanel

startButton

Package org.cipres.kepler

Class org.cipres.kepler.SubsetChooser extends javax.swing.JFrame implements Serializable

Serialized Fields

pnlSubsetChooser

pnlMain

displayObjects

checkboxes