001/* 002 * Copyright (c) 2012-2013 The Regents of the University of California. 003 * All rights reserved. 004 * 005 * Permission is hereby granted, without written agreement and without 006 * license or royalty fees, to use, copy, modify, and distribute this 007 * software and its documentation for any purpose, provided that the above 008 * copyright notice and the following two paragraphs appear in all copies 009 * of this software. 010 * 011 * IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY 012 * FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES 013 * ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF 014 * THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY OF 015 * SUCH DAMAGE. 016 * 017 * THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, 018 * INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF 019 * MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE 020 * PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY OF 021 * CALIFORNIA HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, 022 * ENHANCEMENTS, OR MODIFICATIONS. 023 * 024 */ 025package org.kepler.hadoop.execution; 026 027import java.io.IOException; 028import java.util.Iterator; 029import java.util.LinkedList; 030import java.util.List; 031 032import org.apache.hadoop.conf.Configuration; 033import org.apache.hadoop.io.Writable; 034import org.apache.hadoop.io.WritableComparable; 035import org.apache.log4j.Logger; 036import org.kepler.ddp.actor.pattern.stub.CoGroupInput; 037import org.kepler.hadoop.io.KeyValuePair; 038import org.kepler.hadoop.util.StubUtilities; 039 040import ptolemy.data.Token; 041import ptolemy.kernel.util.IllegalActionException; 042import ptolemy.kernel.util.KernelException; 043 044////////////////////////////////////////////////////////////////////////// 045////KeplerApp4CoGroup 046 047/** 048* This class will parse CoGroup sub-workflow, execute it according to its input, and return execution output. 049* and send it out through fire(). 050* 051* @author Jianwu Wang (jianwu@sdsc.edu) 052* @version $Id: KeplerApp4CoGroup.java 33070 2014-11-12 23:21:09Z crawl $ 053*/ 054public class KeplerApp4CoGroup extends KeplerAppBase { 055 056 static Logger logger = Logger.getLogger(KeplerApp4CoGroup.class.getName()); 057 058 public KeplerApp4CoGroup(Configuration hadoopConf) { 059 super(hadoopConf, "CoGroupInput", "CoGroupOutput"); 060 } 061 062 public List<KeyValuePair> executeWf(WritableComparable key, Iterator<Writable> values1, Iterator<Writable> values2) 063 throws IOException { 064 try { 065 066 if (_sourceActor != null) 067 { 068 ((CoGroupInput) _sourceActor).setInput(StubUtilities.convertToToken(key), 069 StubUtilities.convertToArrayToken(values1), StubUtilities.convertToArrayToken(values2)); 070 } 071 072 if(_runWorkflowLifecyclePerInput) { 073 _manager.execute(); 074 } 075 076 List<KeyValuePair> exeResult = new LinkedList<KeyValuePair>(); 077 if (_sinkActor != null) 078 { 079 final List<Token> tokenList = _sinkActor.getOutput(); 080 if(tokenList != null) { 081 StubUtilities.convertTokenToList(tokenList, exeResult); 082 } else if(_keplerManagerException != null) { 083 throw _keplerManagerException; 084 } 085 } 086 return exeResult; 087 } catch (IllegalActionException e) { 088 throw new RuntimeException("Error getting output for " + _sinkActor.getName() + ".", e); 089 } catch (KernelException e) { 090 throw new RuntimeException("Error executing workflow.", e); 091 } 092 } 093}